| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ribBA [H]
Identifier: 209548191
GI number: 209548191
Start: 610266
End: 611369
Strand: Reverse
Name: ribBA [H]
Synonym: Rleg2_0585
Alternate gene names: 209548191
Gene position: 611369-610266 (Counterclockwise)
Preceding gene: 209548192
Following gene: 209548189
Centisome position: 13.47
GC content: 63.32
Gene sequence:
>1104_bases ATGTCGTATGATCAAAAGCGCGTCGTCGACGCCATCCGGGCCTTCGAGGCCGGCGAGATCGTCGTCGTCATGGACGACAA CGACCGCGAGAACGAGGGCGACCTGATCGTCGCCGCCGTCCATACCACGCCTGAAAAAATGGCCTTCATCGTGCGCCACA CATCCGGCATCGTCTGCGCGCCGATGCCGAAGGAGGAGGCCAAGCGCCTCAACCTCAACGCCATGGTGGCGGAAAACGAT TCGGCCCATACGACGGCCTTCACCGTCTCGGTCGATTTCAAGCACGGCACGACGACCGGCATCTCAGCCGACGACCGGAC GCTGACGGTGCGCAACCTCGCCAATCCGAATGTCGGCGCCGCCGATTTCGTCCGTCCCGGCCATATCTTCCCGCTGGTTT CGCGCGAAGGCGGCGTGCTGATGCGCTCCGGCCATACGGAAGCCGCCGTCGACCTCTGCAAACTCGCCGGCCTGCCGCCG ATCGGCGTTATCTCCGAACTCGTCAATGACGACGGCACCGTCACGCGCGGTCCGCAGGTGGTCGATTTCGCCGAGCAGCA CGGGTTGAAGCTCGTCTCCGTCGCCGATCTCATCGCCTATCGCCAGCGCAAGGAAACGCTGGTCGAGCACGGCACGAGCT TCGACATCGACACACCATTCGGCAAGGCCAAGGCTCATACCTATTCCCTGCCCTGGGACCCGATGCAGCATCTCGCCGTC GTCTTCGGCGACATCCGCGACGGCGTCGACATCCCGGTGCGCCTGCATCCAGAGAATGTCGCCGAGGATCTCTTCGGCAA GAACAGCCCGGTCGATTTCTACATGCAGAAGATTTCCGAGGAAGGCCGCGGCGTCATCGTCTATCTGCGTGAAGGCTCGG TCGGCGTCGGCCATTACGACAACGGCCGCAAGGCCCGCAACCAGGGCCGCGAAGCCCATGCCGAAGCCCAGACGCGCGAC AGCGAATGGCTGGAAATCGGCCTCGGCGCCCAGATCCTCAAGGACCTCGGCGTCAGCTCAATCAAGCTGCTGACCAGCCG CGAACGCCACTATGTCGGCCTGGAAGGTTTCGGCATCAAGATCAGCAAGACGGAGATCTGCTGA
Upstream 100 bases:
>100_bases CCGCGCCGTGCCGATCGGCGAGGCGATGGTCGCCTGCGCCATCGCCGACCATTATCTTCGCGACCGCGGCCAGACCGGCC GTCTGAAATAGGAGCGCCCC
Downstream 100 bases:
>100_bases GGGTTTCTCCTCCCTCATCACGATCAATCAGGCCGTGACCGACTGCCTGATTTCGCTAGCGGATGGCGGCTGATACGGGC ATCTGCGGTGTGAATGTGTC
Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase
Products: NA
Alternate protein names: 3,4-dihydroxy-2-butanone 4-phosphate synthase; DHBP synthase; GTP cyclohydrolase-2; GTP cyclohydrolase II [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSYDQKRVVDAIRAFEAGEIVVVMDDNDRENEGDLIVAAVHTTPEKMAFIVRHTSGIVCAPMPKEEAKRLNLNAMVAEND SAHTTAFTVSVDFKHGTTTGISADDRTLTVRNLANPNVGAADFVRPGHIFPLVSREGGVLMRSGHTEAAVDLCKLAGLPP IGVISELVNDDGTVTRGPQVVDFAEQHGLKLVSVADLIAYRQRKETLVEHGTSFDIDTPFGKAKAHTYSLPWDPMQHLAV VFGDIRDGVDIPVRLHPENVAEDLFGKNSPVDFYMQKISEEGRGVIVYLREGSVGVGHYDNGRKARNQGREAHAEAQTRD SEWLEIGLGAQILKDLGVSSIKLLTSRERHYVGLEGFGIKISKTEIC
Sequences:
>Translated_367_residues MSYDQKRVVDAIRAFEAGEIVVVMDDNDRENEGDLIVAAVHTTPEKMAFIVRHTSGIVCAPMPKEEAKRLNLNAMVAEND SAHTTAFTVSVDFKHGTTTGISADDRTLTVRNLANPNVGAADFVRPGHIFPLVSREGGVLMRSGHTEAAVDLCKLAGLPP IGVISELVNDDGTVTRGPQVVDFAEQHGLKLVSVADLIAYRQRKETLVEHGTSFDIDTPFGKAKAHTYSLPWDPMQHLAV VFGDIRDGVDIPVRLHPENVAEDLFGKNSPVDFYMQKISEEGRGVIVYLREGSVGVGHYDNGRKARNQGREAHAEAQTRD SEWLEIGLGAQILKDLGVSSIKLLTSRERHYVGLEGFGIKISKTEIC >Mature_366_residues SYDQKRVVDAIRAFEAGEIVVVMDDNDRENEGDLIVAAVHTTPEKMAFIVRHTSGIVCAPMPKEEAKRLNLNAMVAENDS AHTTAFTVSVDFKHGTTTGISADDRTLTVRNLANPNVGAADFVRPGHIFPLVSREGGVLMRSGHTEAAVDLCKLAGLPPI GVISELVNDDGTVTRGPQVVDFAEQHGLKLVSVADLIAYRQRKETLVEHGTSFDIDTPFGKAKAHTYSLPWDPMQHLAVV FGDIRDGVDIPVRLHPENVAEDLFGKNSPVDFYMQKISEEGRGVIVYLREGSVGVGHYDNGRKARNQGREAHAEAQTRDS EWLEIGLGAQILKDLGVSSIKLLTSRERHYVGLEGFGIKISKTEIC
Specific function: Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate [H]
COG id: COG0108
COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the GTP cyclohydrolase II family [H]
Homologues:
Organism=Escherichia coli, GI1789420, Length=200, Percent_Identity=49.5, Blast_Score=202, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6320695, Length=201, Percent_Identity=49.7512437810945, Blast_Score=196, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017945 - InterPro: IPR000422 - InterPro: IPR000926 - InterPro: IPR016299 [H]
Pfam domain/function: PF00926 DHBP_synthase; PF00925 GTP_cyclohydro2 [H]
EC number: =4.1.99.12; =3.5.4.25 [H]
Molecular weight: Translated: 40117; Mature: 39986
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYDQKRVVDAIRAFEAGEIVVVMDDNDRENEGDLIVAAVHTTPEKMAFIVRHTSGIVCA CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCHHHEEEEEEECCCEEEC PMPKEEAKRLNLNAMVAENDSAHTTAFTVSVDFKHGTTTGISADDRTLTVRNLANPNVGA CCCHHHHHHCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCH ADFVRPGHIFPLVSREGGVLMRSGHTEAAVDLCKLAGLPPIGVISELVNDDGTVTRGPQV HHCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCE VDFAEQHGLKLVSVADLIAYRQRKETLVEHGTSFDIDTPFGKAKAHTYSLPWDPMQHLAV EEHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH VFGDIRDGVDIPVRLHPENVAEDLFGKNSPVDFYMQKISEEGRGVIVYLREGSVGVGHYD HHHHHCCCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCEECCCCC NGRKARNQGREAHAEAQTRDSEWLEIGLGAQILKDLGVSSIKLLTSRERHYVGLEGFGIK CCHHHHHCCCHHHHHHHCCCCCEEEECCCHHHHHHCCCCCEEEEECCCCEEEEEECCCEE ISKTEIC EECCCCC >Mature Secondary Structure SYDQKRVVDAIRAFEAGEIVVVMDDNDRENEGDLIVAAVHTTPEKMAFIVRHTSGIVCA CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCHHHEEEEEEECCCEEEC PMPKEEAKRLNLNAMVAENDSAHTTAFTVSVDFKHGTTTGISADDRTLTVRNLANPNVGA CCCHHHHHHCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCH ADFVRPGHIFPLVSREGGVLMRSGHTEAAVDLCKLAGLPPIGVISELVNDDGTVTRGPQV HHCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCE VDFAEQHGLKLVSVADLIAYRQRKETLVEHGTSFDIDTPFGKAKAHTYSLPWDPMQHLAV EEHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH VFGDIRDGVDIPVRLHPENVAEDLFGKNSPVDFYMQKISEEGRGVIVYLREGSVGVGHYD HHHHHCCCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCEECCCCC NGRKARNQGREAHAEAQTRDSEWLEIGLGAQILKDLGVSSIKLLTSRERHYVGLEGFGIK CCHHHHHCCCHHHHHHHCCCCCEEEECCCHHHHHHCCCCCEEEEECCCCEEEEEECCCEE ISKTEIC EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]