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The map label for this gene is 209548123

Identifier: 209548123

GI number: 209548123

Start: 531887

End: 533044

Strand: Reverse

Name: 209548123

Synonym: Rleg2_0517

Alternate gene names: NA

Gene position: 533044-531887 (Counterclockwise)

Preceding gene: 209548126

Following gene: 209548122

Centisome position: 11.75

GC content: 64.51

Gene sequence:

>1158_bases
ATGAGAGAGCAGTCCCTGGCAGGGCAGGCCGCATTTGCGCCTACCAATACGGCAGATATTGCCGATGCGATGATCGTGTC
CTCCGGGCTGCGAATCGAGGTCGATAGGCGCCGTGGGCGCGGGGCGGGATTGAACCCGACAGGTAGGTTCGAGGCGCTGC
AGCGCGAGACCTTCGATGACGGCTGGCAGACGCTGGAAGAGCTGCCGCCGTTCAGGACGGACGTGCAGATCGAGAAGCCG
CGCACGGCCATTACCCGCAACGAATCGCCTGACATTGGCTTCGATCGCTCGATCAACCCCTATCGCGGCTGCGAGCATGG
CTGCATCTATTGTTTCGCCCGGCCGACGCACGCCTATATGGGGCTTTCGGCGGGGCTCGATTTCGAGACGAAGCTGTTTG
CCAAGCCGGATGCGGCAAAGCTGCTGGAGCGGGAGCTTGCCAAGCCGGGCTACAAGGTGCGGGCGATCGCGATCGGCACC
AATACCGACCCCTATCAGCCGATCGAAAAGGAATGGCGCATCATGCGCGGCATTCTCGAGGTCTTGAACAAGGCGAACCA
CCCGGTATCGATCGTCACCAAGTCTGCGATGATCCTGCGGGATCTCGACATTCTGCAGGAGATGGCGGCGAAGAACCTGG
TGCGCGTCGGCATCTCGGTCACCACGCTCGACCGCAAGCTTGCCCGGACGATGGAGCCGCGCGCCGCCACGCCGCCGCGC
CGGCTGGAGACCATCCACACGCTGTCGGAGGCAGGTATCCAGACGGCGGTGATGGCCGCCCCGCTCATTCCGGCGCTGAA
CGATCACGAGCTGGAGCGCATCCTCGAATCGGCCAAGGCTGCCGGCGCCGCCGAGGCGAGTTATGTCATCCTGAGACTGC
CGCTCGAGGTCAGCCCGCTCTTCCGCGACTGGCTGCTGCAGCATTATCCCGATCGCTACCGGCATGTTATGTCGCTGGTG
CGCTCGATGCGCGGCGGCAAGGATTACGATGCCGACTTCGGCAAGCGCATGAAGGGCGCTGGTCCCTATGCCTGGCAGAT
CGCCCGGCGCTTTGAAATGGCCGCCCGACGTTGCGGCCTGACGCGGCGCGGCATGCCGCTGCGCGACGACCTGTTCGTGC
CGCCGGATGGCAGCGGCGTGCAGCTGTCATTGCTCTAG

Upstream 100 bases:

>100_bases
GCGTTTTGCGCATTTTGTTCTTGCATTGTTCTTGTTTTGCGGATAGGAATTTAATCATCAAAACGGGCGGAAGCGATGGC
TTTTGCCGCGGGAGAATCCG

Downstream 100 bases:

>100_bases
GCTTTGTTCTTACGCAATTCTTGGCAAAAGCGCTTTGCGCTTTGCCCGGGGAAAACCGCGGCGCACTTTTCCTGGAATTG
CTTTTTGACTGTTTACGCAA

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MREQSLAGQAAFAPTNTADIADAMIVSSGLRIEVDRRRGRGAGLNPTGRFEALQRETFDDGWQTLEELPPFRTDVQIEKP
RTAITRNESPDIGFDRSINPYRGCEHGCIYCFARPTHAYMGLSAGLDFETKLFAKPDAAKLLERELAKPGYKVRAIAIGT
NTDPYQPIEKEWRIMRGILEVLNKANHPVSIVTKSAMILRDLDILQEMAAKNLVRVGISVTTLDRKLARTMEPRAATPPR
RLETIHTLSEAGIQTAVMAAPLIPALNDHELERILESAKAAGAAEASYVILRLPLEVSPLFRDWLLQHYPDRYRHVMSLV
RSMRGGKDYDADFGKRMKGAGPYAWQIARRFEMAARRCGLTRRGMPLRDDLFVPPDGSGVQLSLL

Sequences:

>Translated_385_residues
MREQSLAGQAAFAPTNTADIADAMIVSSGLRIEVDRRRGRGAGLNPTGRFEALQRETFDDGWQTLEELPPFRTDVQIEKP
RTAITRNESPDIGFDRSINPYRGCEHGCIYCFARPTHAYMGLSAGLDFETKLFAKPDAAKLLERELAKPGYKVRAIAIGT
NTDPYQPIEKEWRIMRGILEVLNKANHPVSIVTKSAMILRDLDILQEMAAKNLVRVGISVTTLDRKLARTMEPRAATPPR
RLETIHTLSEAGIQTAVMAAPLIPALNDHELERILESAKAAGAAEASYVILRLPLEVSPLFRDWLLQHYPDRYRHVMSLV
RSMRGGKDYDADFGKRMKGAGPYAWQIARRFEMAARRCGLTRRGMPLRDDLFVPPDGSGVQLSLL
>Mature_385_residues
MREQSLAGQAAFAPTNTADIADAMIVSSGLRIEVDRRRGRGAGLNPTGRFEALQRETFDDGWQTLEELPPFRTDVQIEKP
RTAITRNESPDIGFDRSINPYRGCEHGCIYCFARPTHAYMGLSAGLDFETKLFAKPDAAKLLERELAKPGYKVRAIAIGT
NTDPYQPIEKEWRIMRGILEVLNKANHPVSIVTKSAMILRDLDILQEMAAKNLVRVGISVTTLDRKLARTMEPRAATPPR
RLETIHTLSEAGIQTAVMAAPLIPALNDHELERILESAKAAGAAEASYVILRLPLEVSPLFRDWLLQHYPDRYRHVMSLV
RSMRGGKDYDADFGKRMKGAGPYAWQIARRFEMAARRCGLTRRGMPLRDDLFVPPDGSGVQLSLL

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43050; Mature: 43050

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREQSLAGQAAFAPTNTADIADAMIVSSGLRIEVDRRRGRGAGLNPTGRFEALQRETFDD
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
GWQTLEELPPFRTDVQIEKPRTAITRNESPDIGFDRSINPYRGCEHGCIYCFARPTHAYM
HHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHH
GLSAGLDFETKLFAKPDAAKLLERELAKPGYKVRAIAIGTNTDPYQPIEKEWRIMRGILE
HHCCCCCCCHHEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH
VLNKANHPVSIVTKSAMILRDLDILQEMAAKNLVRVGISVTTLDRKLARTMEPRAATPPR
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHH
RLETIHTLSEAGIQTAVMAAPLIPALNDHELERILESAKAAGAAEASYVILRLPLEVSPL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
FRDWLLQHYPDRYRHVMSLVRSMRGGKDYDADFGKRMKGAGPYAWQIARRFEMAARRCGL
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
TRRGMPLRDDLFVPPDGSGVQLSLL
CCCCCCCCCCEECCCCCCCEEEEEC
>Mature Secondary Structure
MREQSLAGQAAFAPTNTADIADAMIVSSGLRIEVDRRRGRGAGLNPTGRFEALQRETFDD
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
GWQTLEELPPFRTDVQIEKPRTAITRNESPDIGFDRSINPYRGCEHGCIYCFARPTHAYM
HHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHH
GLSAGLDFETKLFAKPDAAKLLERELAKPGYKVRAIAIGTNTDPYQPIEKEWRIMRGILE
HHCCCCCCCHHEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH
VLNKANHPVSIVTKSAMILRDLDILQEMAAKNLVRVGISVTTLDRKLARTMEPRAATPPR
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHH
RLETIHTLSEAGIQTAVMAAPLIPALNDHELERILESAKAAGAAEASYVILRLPLEVSPL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
FRDWLLQHYPDRYRHVMSLVRSMRGGKDYDADFGKRMKGAGPYAWQIARRFEMAARRCGL
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
TRRGMPLRDDLFVPPDGSGVQLSLL
CCCCCCCCCCEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]