| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548116
Identifier: 209548116
GI number: 209548116
Start: 526475
End: 527683
Strand: Direct
Name: 209548116
Synonym: Rleg2_0510
Alternate gene names: NA
Gene position: 526475-527683 (Clockwise)
Preceding gene: 209548114
Following gene: 209548117
Centisome position: 11.6
GC content: 62.03
Gene sequence:
>1209_bases ATGGAATGTTCCCGCGTTCCATGCCCGGAGTTGGTGTTGCGTCGAAAGAGCTCTCCCCGTAGCAAGCTGCGTCTTCTTCC CGAGAATTGGGTGTCGCCCGCAATCTTCGGGCTCGCCGGCTGGCTGATCTTCCCGAGCGTCGCATCTCATGCCGATCTCG CCGCCATGCTGGCCGGTCTCGATCGGGAGGGGGAGAACTGGCGCATGGTGCTGACCAATTCGCCGGTCGGCTCGATCCAT CAGGCCGAACTTGCCTTTGCCGATCCGGCAGTGACGGGCTCGATCCCGTCGGGCGCCGGCATGGTGCTTCCCGATGGCCG CAAGGTGGCTTTCACCAAGGAAAAAGGCCACGAGGACACGCCCGACGAGGATCGCGTCAACCGCGGCACCAAGAAAGGCC GCGTGGTGGCCGTCGAGAAGATGCAGCCGCCCAAGGATTTTTCCGCCGGCTCGATCCTCGAGCGCACCAGGATGCTCTTC ACCCCGAATTTCGATCTCAAGGACAGGTCGGCTTTCGTCAAGCCGAAGATCCAGGGCAAGGAAATCGAGATCGCCACTTC TTTCTATAAGAAGCAGCCGGTGGTGACCGATAATGGCGTGCCGGCAATGCTCGCAAGCCTCGTCACCAGCGACAAGGCCG ATGTCCTGGCCACGGCCTATGGGCCGGCGGCCCCCGACTATTCCCGCCAATCGCCTTTCGATTCCATTCTGACCGAGCAG GATAGCGGCCGCTTCGTTCCCCAGATCGGCCCGCGCGACCATGCCTGGGCCGCCAGTATATTGTCGCCGAGCGTCTTTTC CGCTCGCGAGCAGCAGTGCCTTGCCTCCGGCATTTATTTCGAGGCGAGGGGAGAATCGGTGAAGGGCCAGGCGGCCGTCG CCCAGGTCATCCTCAACCGCGTCCGCAACCCGTCCTATCCGAAAACCATCTGCGGCGTGGTCTACCAGAACGAGGATTGG CGCAACCGCTGCCAGTTTTCCTTCGCCTGCGACAGCATCAAGGACAGGGTGAACTCGGAATATCACTGGCGGATGGCCCG CGATGTGGCGATGGCGGTGACATCAGGCAAGATCTGGCTGCCGCAGGTGGGCTCGGCGACGCATTACCATGCCGTCTATG TCAGGCCGAAATGGGCAAAGACCATGGAAAAGGTCGGCCGCATCGGTCTTCACGTCTTCTATCGCACCTATGGCGGCGGC TGGAGCTGA
Upstream 100 bases:
>100_bases GTCCCTGTCAAACAAGCCACATTAGAACATGCAAAACTTCGCATGGTCACATTCCGGCACGCCCCGTTAACCCGACGTCA AGGTTAATGAGAGATTTTCG
Downstream 100 bases:
>100_bases GATAAATCGCTCCGGCAAGCCGATTTGCCGGGCTTAAAAGCGGATTCTTTCCATCGAATTTAAGAGATCGCCCCAGAAAC GAGTTATCTCTTTGATTTGA
Product: cell wall hydrolase SleB
Products: NA
Alternate protein names: Cell Wall Hydrolase Family; SleB-Like Protein; Cell Wall Hydrolase; Hydrolase; Spore Cortex-Lytic; Cell Wall Hydrolase Domain Protein; Cell Wall Hydrolyses; Spore-Cortex-Lytic Prepeptide; Cell Wall Hydrolase Sleb; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase Domain-Containing Protein; Cell Wall Hydrolase Family Protein
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MECSRVPCPELVLRRKSSPRSKLRLLPENWVSPAIFGLAGWLIFPSVASHADLAAMLAGLDREGENWRMVLTNSPVGSIH QAELAFADPAVTGSIPSGAGMVLPDGRKVAFTKEKGHEDTPDEDRVNRGTKKGRVVAVEKMQPPKDFSAGSILERTRMLF TPNFDLKDRSAFVKPKIQGKEIEIATSFYKKQPVVTDNGVPAMLASLVTSDKADVLATAYGPAAPDYSRQSPFDSILTEQ DSGRFVPQIGPRDHAWAASILSPSVFSAREQQCLASGIYFEARGESVKGQAAVAQVILNRVRNPSYPKTICGVVYQNEDW RNRCQFSFACDSIKDRVNSEYHWRMARDVAMAVTSGKIWLPQVGSATHYHAVYVRPKWAKTMEKVGRIGLHVFYRTYGGG WS
Sequences:
>Translated_402_residues MECSRVPCPELVLRRKSSPRSKLRLLPENWVSPAIFGLAGWLIFPSVASHADLAAMLAGLDREGENWRMVLTNSPVGSIH QAELAFADPAVTGSIPSGAGMVLPDGRKVAFTKEKGHEDTPDEDRVNRGTKKGRVVAVEKMQPPKDFSAGSILERTRMLF TPNFDLKDRSAFVKPKIQGKEIEIATSFYKKQPVVTDNGVPAMLASLVTSDKADVLATAYGPAAPDYSRQSPFDSILTEQ DSGRFVPQIGPRDHAWAASILSPSVFSAREQQCLASGIYFEARGESVKGQAAVAQVILNRVRNPSYPKTICGVVYQNEDW RNRCQFSFACDSIKDRVNSEYHWRMARDVAMAVTSGKIWLPQVGSATHYHAVYVRPKWAKTMEKVGRIGLHVFYRTYGGG WS >Mature_402_residues MECSRVPCPELVLRRKSSPRSKLRLLPENWVSPAIFGLAGWLIFPSVASHADLAAMLAGLDREGENWRMVLTNSPVGSIH QAELAFADPAVTGSIPSGAGMVLPDGRKVAFTKEKGHEDTPDEDRVNRGTKKGRVVAVEKMQPPKDFSAGSILERTRMLF TPNFDLKDRSAFVKPKIQGKEIEIATSFYKKQPVVTDNGVPAMLASLVTSDKADVLATAYGPAAPDYSRQSPFDSILTEQ DSGRFVPQIGPRDHAWAASILSPSVFSAREQQCLASGIYFEARGESVKGQAAVAQVILNRVRNPSYPKTICGVVYQNEDW RNRCQFSFACDSIKDRVNSEYHWRMARDVAMAVTSGKIWLPQVGSATHYHAVYVRPKWAKTMEKVGRIGLHVFYRTYGGG WS
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44419; Mature: 44419
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECSRVPCPELVLRRKSSPRSKLRLLPENWVSPAIFGLAGWLIFPSVASHADLAAMLAGL CCCCCCCCHHHHHHCCCCCHHHHEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DREGENWRMVLTNSPVGSIHQAELAFADPAVTGSIPSGAGMVLPDGRKVAFTKEKGHEDT CCCCCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCC PDEDRVNRGTKKGRVVAVEKMQPPKDFSAGSILERTRMLFTPNFDLKDRSAFVKPKIQGK CCHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEECCCCCCC EIEIATSFYKKQPVVTDNGVPAMLASLVTSDKADVLATAYGPAAPDYSRQSPFDSILTEQ EEEEEHHHHHCCCCEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHCCC DSGRFVPQIGPRDHAWAASILSPSVFSAREQQCLASGIYFEARGESVKGQAAVAQVILNR CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHH VRNPSYPKTICGVVYQNEDWRNRCQFSFACDSIKDRVNSEYHWRMARDVAMAVTSGKIWL HCCCCCCHHHEEEEECCCCHHHHCEEEEHHHHHHHHHCCCHHHHHHHHHHEEEECCCEEC PQVGSATHYHAVYVRPKWAKTMEKVGRIGLHVFYRTYGGGWS CCCCCCCEEEEEEECCHHHHHHHHHHHHHEEEEEEECCCCCC >Mature Secondary Structure MECSRVPCPELVLRRKSSPRSKLRLLPENWVSPAIFGLAGWLIFPSVASHADLAAMLAGL CCCCCCCCHHHHHHCCCCCHHHHEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DREGENWRMVLTNSPVGSIHQAELAFADPAVTGSIPSGAGMVLPDGRKVAFTKEKGHEDT CCCCCCEEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCC PDEDRVNRGTKKGRVVAVEKMQPPKDFSAGSILERTRMLFTPNFDLKDRSAFVKPKIQGK CCHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEECCCCCCC EIEIATSFYKKQPVVTDNGVPAMLASLVTSDKADVLATAYGPAAPDYSRQSPFDSILTEQ EEEEEHHHHHCCCCEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHCCC DSGRFVPQIGPRDHAWAASILSPSVFSAREQQCLASGIYFEARGESVKGQAAVAQVILNR CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHH VRNPSYPKTICGVVYQNEDWRNRCQFSFACDSIKDRVNSEYHWRMARDVAMAVTSGKIWL HCCCCCCHHHEEEEECCCCHHHHCEEEEHHHHHHHHHCCCHHHHHHHHHHEEEECCCEEC PQVGSATHYHAVYVRPKWAKTMEKVGRIGLHVFYRTYGGGWS CCCCCCCEEEEEEECCHHHHHHHHHHHHHEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA