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The map label for this gene is yqjF [H]

Identifier: 209548074

GI number: 209548074

Start: 477580

End: 477993

Strand: Reverse

Name: yqjF [H]

Synonym: Rleg2_0467

Alternate gene names: 209548074

Gene position: 477993-477580 (Counterclockwise)

Preceding gene: 209548076

Following gene: 209548070

Centisome position: 10.53

GC content: 61.35

Gene sequence:

>414_bases
ATGTCGAACGCCATTATCCTGATTGCCCGCATTCTTCTGTCTTTCATGTTCGTCCTGTCCGGCTTCATGAAACTAACCGA
TCCTGCCGGTACTGCGGGCATGATCGCCGGTGCCGGCCTGCCCGCAGCAACCCTGTTGGCCTATGTCGCAGGCCTCTTCG
AACTGCTCGCCGGCCTTGCCGTTCTCACAGGCTTCCAGGTCCGCATTGCCGGATGGCTGCTCGCGGGCTTCTGCGTCTTC
ACGGCCGTTGCCTTCCATCTGCCCTACGCAAGTGGCGCGGAGCTCGTGAACATCCTCAACCAGATCATGGTCATGAAGAA
CATCACGCTGGCCGGCGCGTACATATTGCTCGCCACGGTCGGTGCCGGTGCCTATTCGATTGACGCCCGCCGCGGCGCCT
ATGCGGCTGCCTGA

Upstream 100 bases:

>100_bases
TTTCCATAACGAAGGAAAAGAGCGACATAGGAGGCATCCGAGGTCTACATGGTGCCGGGGCACCAAGATCTCCAGAGTCA
TTCAAACGGAGACAGCATCC

Downstream 100 bases:

>100_bases
TCCAACAGACATCCTCCCAGACATGCAGAACCCGCCGTCATTGAATTGACGGCGGGTTTTCTTATGCATTCAATGATCGC
TAGATCAGAGGGCGGCGCGC

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSNAIILIARILLSFMFVLSGFMKLTDPAGTAGMIAGAGLPAATLLAYVAGLFELLAGLAVLTGFQVRIAGWLLAGFCVF
TAVAFHLPYASGAELVNILNQIMVMKNITLAGAYILLATVGAGAYSIDARRGAYAAA

Sequences:

>Translated_137_residues
MSNAIILIARILLSFMFVLSGFMKLTDPAGTAGMIAGAGLPAATLLAYVAGLFELLAGLAVLTGFQVRIAGWLLAGFCVF
TAVAFHLPYASGAELVNILNQIMVMKNITLAGAYILLATVGAGAYSIDARRGAYAAA
>Mature_136_residues
SNAIILIARILLSFMFVLSGFMKLTDPAGTAGMIAGAGLPAATLLAYVAGLFELLAGLAVLTGFQVRIAGWLLAGFCVFT
AVAFHLPYASGAELVNILNQIMVMKNITLAGAYILLATVGAGAYSIDARRGAYAAA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=128, Percent_Identity=39.0625, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI145693171, Length=126, Percent_Identity=34.9206349206349, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14101; Mature: 13970

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAIILIARILLSFMFVLSGFMKLTDPAGTAGMIAGAGLPAATLLAYVAGLFELLAGLA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VLTGFQVRIAGWLLAGFCVFTAVAFHLPYASGAELVNILNQIMVMKNITLAGAYILLATV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGAYSIDARRGAYAAA
CCCCEECCCCCCCCCCC
>Mature Secondary Structure 
SNAIILIARILLSFMFVLSGFMKLTDPAGTAGMIAGAGLPAATLLAYVAGLFELLAGLA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VLTGFQVRIAGWLLAGFCVFTAVAFHLPYASGAELVNILNQIMVMKNITLAGAYILLATV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGAYSIDARRGAYAAA
CCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]