| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is rrmA [C]
Identifier: 209548030
GI number: 209548030
Start: 432661
End: 433473
Strand: Direct
Name: rrmA [C]
Synonym: Rleg2_0422
Alternate gene names: 209548030
Gene position: 432661-433473 (Clockwise)
Preceding gene: 209548029
Following gene: 209548031
Centisome position: 9.53
GC content: 55.35
Gene sequence:
>813_bases ATGTCATTTGTTCGTACGACTCTCAACCGGTTTCCGGTGTTGAAGAGCCAGCTGAAGCGATTGCGTGAACGGCTGCAGCC CGCGGCATCGGTATCGTCCCACTACGTCGAGATCGATTCAGCTCGGCGAGACAGCGAAAGCTCGCGTCTTGCCGCATCAT GGAAAGCGAATGATCTGCCTGCGCGCCAGAGAGCGCTCGTCGAGCGCCAGTTGAAGGAATATCGCGGCGGCGCTTCCATC GATGTATTCGATGTTTTTACCGCTGCGCTGCGTAAAATCGACAATCTCCCGGCCGCCGGTTCGTTGCTCGAAATCGGTTG CTCCAGCGGATATTACTCCGAGGTCCTGGAGGTAAATGGCCTGCCGTTGCGGTATCACGGCTGCGATTATTCCGATGCCT TCATCGACATGGCGCGCCGCATCTATCCGGCACTGTCGTTCGATGTGGAGGATGCAACACGGCTCAGTTATCAGGACAAT GCTTTTGATATTGTGATTTCGGGATGCTGCCTGCTGCATATCGCCGACTATGAGGCGGCGATTGCAGAAAGCGCCCGCGT CGCCAAAGACTACGTCATCTTTCACCGCACTCCCATCGTCTATGGCGAACCGACCAAGTATTTCCGCAAGCAGGCCTATG GCGTCGAGACAATGGAGATCCATTTCTCCGAACCGCAGCTATTGGACAGCTTTCGGGTTCACGGCCTCGAAGTCCTTTCG ACCTTCACGCTGAATGAAAACGCGGATCCGCGTGACAGCAGCAAGGGCAATGCAAACCGCACTTATTTGTGCAGGAAACA ATCCCAGTCATGA
Upstream 100 bases:
>100_bases CGAAGGCCGGCCAGGCGAGGACGCTGAAAGATCACACCTACAAGTCGAGAATGAAAGAGTTGATGCCGATCCTCGAGAGA CATCTGGAGAAACAGGGCTG
Downstream 100 bases:
>100_bases CGACCTACTTCTGTACCCTTTTCGACAGCGGTTATCTCATCAAGGGGATGGCCATGATGGAGAGCCTCGTTCGATGGTGC CCAGACGCGCATATTTTTGT
Product: type 11 methyltransferase
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: Radical SAM Domain Protein
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSFVRTTLNRFPVLKSQLKRLRERLQPAASVSSHYVEIDSARRDSESSRLAASWKANDLPARQRALVERQLKEYRGGASI DVFDVFTAALRKIDNLPAAGSLLEIGCSSGYYSEVLEVNGLPLRYHGCDYSDAFIDMARRIYPALSFDVEDATRLSYQDN AFDIVISGCCLLHIADYEAAIAESARVAKDYVIFHRTPIVYGEPTKYFRKQAYGVETMEIHFSEPQLLDSFRVHGLEVLS TFTLNENADPRDSSKGNANRTYLCRKQSQS
Sequences:
>Translated_270_residues MSFVRTTLNRFPVLKSQLKRLRERLQPAASVSSHYVEIDSARRDSESSRLAASWKANDLPARQRALVERQLKEYRGGASI DVFDVFTAALRKIDNLPAAGSLLEIGCSSGYYSEVLEVNGLPLRYHGCDYSDAFIDMARRIYPALSFDVEDATRLSYQDN AFDIVISGCCLLHIADYEAAIAESARVAKDYVIFHRTPIVYGEPTKYFRKQAYGVETMEIHFSEPQLLDSFRVHGLEVLS TFTLNENADPRDSSKGNANRTYLCRKQSQS >Mature_269_residues SFVRTTLNRFPVLKSQLKRLRERLQPAASVSSHYVEIDSARRDSESSRLAASWKANDLPARQRALVERQLKEYRGGASID VFDVFTAALRKIDNLPAAGSLLEIGCSSGYYSEVLEVNGLPLRYHGCDYSDAFIDMARRIYPALSFDVEDATRLSYQDNA FDIVISGCCLLHIADYEAAIAESARVAKDYVIFHRTPIVYGEPTKYFRKQAYGVETMEIHFSEPQLLDSFRVHGLEVLST FTLNENADPRDSSKGNANRTYLCRKQSQS
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 30500; Mature: 30368
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVRTTLNRFPVLKSQLKRLRERLQPAASVSSHYVEIDSARRDSESSRLAASWKANDLP CCHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHEEEECCCCCCCCCHHEEECCCCCCCC ARQRALVERQLKEYRGGASIDVFDVFTAALRKIDNLPAAGSLLEIGCSSGYYSEVLEVNG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEECCCCCHHHHHHHCCC LPLRYHGCDYSDAFIDMARRIYPALSFDVEDATRLSYQDNAFDIVISGCCLLHIADYEAA CEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHCCCEEEECCHHHH IAESARVAKDYVIFHRTPIVYGEPTKYFRKQAYGVETMEIHFSEPQLLDSFRVHGLEVLS HHHHHHHHHHEEEEECCCEEECCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH TFTLNENADPRDSSKGNANRTYLCRKQSQS EEEECCCCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure SFVRTTLNRFPVLKSQLKRLRERLQPAASVSSHYVEIDSARRDSESSRLAASWKANDLP CHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHEEEECCCCCCCCCHHEEECCCCCCCC ARQRALVERQLKEYRGGASIDVFDVFTAALRKIDNLPAAGSLLEIGCSSGYYSEVLEVNG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEECCCCCHHHHHHHCCC LPLRYHGCDYSDAFIDMARRIYPALSFDVEDATRLSYQDNAFDIVISGCCLLHIADYEAA CEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHCCCEEEECCHHHH IAESARVAKDYVIFHRTPIVYGEPTKYFRKQAYGVETMEIHFSEPQLLDSFRVHGLEVLS HHHHHHHHHHEEEEECCCEEECCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH TFTLNENADPRDSSKGNANRTYLCRKQSQS EEEECCCCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA