| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is acsA1 [H]
Identifier: 209547988
GI number: 209547988
Start: 389521
End: 391473
Strand: Direct
Name: acsA1 [H]
Synonym: Rleg2_0380
Alternate gene names: 209547988
Gene position: 389521-391473 (Clockwise)
Preceding gene: 209547986
Following gene: 209547990
Centisome position: 8.58
GC content: 63.9
Gene sequence:
>1953_bases ATGCAGGATAACAGACCACTTTGGGTGCCCTCGGCGGAAGCCGTCGCAAGAAGCCCGATCCACGCCTTCATGGCGCGCTG CAATGCCGATTTCGGGCTTTCGCTTTCGGGCTTTGAAGATCTGCATGCCTGGTCGGTGGCCGAGCGGGAGAATTTCTGGT CGGCCGTCTGGGATTTCTGCGGCGTGAAGGGGGAGCGCGGCGCAGAGGTGCTCATTAATGGCGACCGCATGCTGGAGGCT CGCTTCTTTCCAAATGCGACGCTGAACTTCGCTGAGAACCTGCTGGCCGGCCGCGGTGATGGTGATGCCATCGTCTTTCG CGGCGAGGACAAGGCTGAGGATCGCTGGTCGTGGGACCGGCTGCGGGCGCTGGTCTCGAAGCTGCAGCAGGCCTTCAAGG CGCAGGGGATCGGCGAGGGCGACCGTATTGCTGCGATGATGCCGAACATGCCGGAGACCGTCGCCGCCATGCTGGCGGCC GCCTCGATCGGCGCTATCTGGTCGTCCTGCTCCCCCGATTTCGGCGAGCAGGGCGTGCTCGACCGCTTCGGCCAGATCGG CCCGAAGCTGTTCATCGCCTGCGATGCCTATTGGTATTCCGGCAAGCTGCAGGATGTCGGCCCCAAGGTCGCCGCGGTCG CCAAAAGCTTGGGCGTGCCGACGATCGTCGTCCACTATGCCGGCGATGCCGAGGCGGTGGCGCGCGCAACGCCTGGGGCT TCGACGCTGGAAACCTTCGTCGCGCCCTATCAGGCAAGAGAGGTCGAGTTCACGCCGCTTGCCTTTGCCCATCCACTCTA CATTCTGTTTTCCTCCGGCACCACGGGCGTGCCGAAATGCATCGTCCATTCGGCCGGCGGCACGCTGTTGCAGCATCTCA AGGAGCAGCGGCTGCATTGCGGCCTTAAGGCCGGCGAGAAGCTCTTCTACTTCACCACCTGCGGCTGGATGATGTGGAAC TGGCTGGTCAGCGGTCTTGCCAGCGGCGCCACGCTCTGCCTGTTCGACGGTTCGCCTTTCGCGCCGGATGGCAATGTGCT GTTCGACTACGCCGCGGCCGAGAACTTCGCGATCTTCGGCACCTCTGCGAAATATATCGATGCGGTGCGCAAAAGCGGGC TGACGCCGCGCACGAGCCACGATCTTTCCAGCCTGCGGCTTATGACCTCGACCGGTTCGCCGCTGTCGCCTGAGGGCTTC ACCTTCGTCTACGAGGGCATCAAGGCGGATGTGCAGCTCGCCTCGATCTCCGGCGGCACCGATATCGTCTCCTGCTTCGT GCTCGGCAATCCGCTGCAGCCGGTCTGGCGCGGCGAGATCCAGGGGGCCGGCCTCGGCCTTGCGGTCGATGTCTGGAACG ATGACGGCAAGCCGGTGCGCGGCGAAAAGGGTGAACTCGTCTGCACCAAGGCCTTCCCGTCGATGCCGGTGATGTTCTGG AACGATCCCGACGGCGCCAAATATCGCGCCGCCTATTTCGACCGGTTCGACAATGTCTGGTGCCATGGCGATTTTGCCGA ATGGACCGAGCATGGCGGCCTCGTCATCCACGGCCGTTCGGATGCGACGCTCAATCCCGGCGGCGTGCGCATCGGCACGG CCGAGATTTATAATCAGGTGGAGCAAATGGAGGAAGTGGCCGAGGCGCTGTGCATCGGCCAGGAGTGGGACGACGACGTG CGCGTCATCCTCTTCGTTCGCCTTGCCCCCGGCGTGACGCTGACCGAGGATCTGATCAAGGCGATCAAGACGCGGATCCG CACCGGCGCCTCGCCGCGGCACGTGCCGGCCAAGATCATCGCGGTCGCCGATATCCCCCGCACCAAATCCGGCAAGATCG TCGAGCTTGCGGTGCGCGAGGTCGTTCACAACAGGCCGGTGAAAAACCAGGAAGCGCTCGCCAATCCCGAGGCGTTGCGG CTCTTTGCCGGGCTGGAGGAACTCAAGGATTGA
Upstream 100 bases:
>100_bases ACGCATCGGCCTTCTGAATGCATAGGTTGGGATCGCGTCGGTTCCGCACTTTATAATGCAATGCAGCATGATATAAAGGC GGGATTGGGAGGAGGATTGA
Downstream 100 bases:
>100_bases GAGCGGACCGGAAGCTACAAGCTTTTATCACTTATCGATGCACTGTCATGGAAACCTTTCGTTAAGAAAGGTTTGTCAAA TCTAAAAGCCAACTTGGGGG
Product: acetoacetyl-CoA synthetase
Products: NA
Alternate protein names: Acetoacetate--CoA ligase 1; Acyl-activating enzyme 1 [H]
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MQDNRPLWVPSAEAVARSPIHAFMARCNADFGLSLSGFEDLHAWSVAERENFWSAVWDFCGVKGERGAEVLINGDRMLEA RFFPNATLNFAENLLAGRGDGDAIVFRGEDKAEDRWSWDRLRALVSKLQQAFKAQGIGEGDRIAAMMPNMPETVAAMLAA ASIGAIWSSCSPDFGEQGVLDRFGQIGPKLFIACDAYWYSGKLQDVGPKVAAVAKSLGVPTIVVHYAGDAEAVARATPGA STLETFVAPYQAREVEFTPLAFAHPLYILFSSGTTGVPKCIVHSAGGTLLQHLKEQRLHCGLKAGEKLFYFTTCGWMMWN WLVSGLASGATLCLFDGSPFAPDGNVLFDYAAAENFAIFGTSAKYIDAVRKSGLTPRTSHDLSSLRLMTSTGSPLSPEGF TFVYEGIKADVQLASISGGTDIVSCFVLGNPLQPVWRGEIQGAGLGLAVDVWNDDGKPVRGEKGELVCTKAFPSMPVMFW NDPDGAKYRAAYFDRFDNVWCHGDFAEWTEHGGLVIHGRSDATLNPGGVRIGTAEIYNQVEQMEEVAEALCIGQEWDDDV RVILFVRLAPGVTLTEDLIKAIKTRIRTGASPRHVPAKIIAVADIPRTKSGKIVELAVREVVHNRPVKNQEALANPEALR LFAGLEELKD
Sequences:
>Translated_650_residues MQDNRPLWVPSAEAVARSPIHAFMARCNADFGLSLSGFEDLHAWSVAERENFWSAVWDFCGVKGERGAEVLINGDRMLEA RFFPNATLNFAENLLAGRGDGDAIVFRGEDKAEDRWSWDRLRALVSKLQQAFKAQGIGEGDRIAAMMPNMPETVAAMLAA ASIGAIWSSCSPDFGEQGVLDRFGQIGPKLFIACDAYWYSGKLQDVGPKVAAVAKSLGVPTIVVHYAGDAEAVARATPGA STLETFVAPYQAREVEFTPLAFAHPLYILFSSGTTGVPKCIVHSAGGTLLQHLKEQRLHCGLKAGEKLFYFTTCGWMMWN WLVSGLASGATLCLFDGSPFAPDGNVLFDYAAAENFAIFGTSAKYIDAVRKSGLTPRTSHDLSSLRLMTSTGSPLSPEGF TFVYEGIKADVQLASISGGTDIVSCFVLGNPLQPVWRGEIQGAGLGLAVDVWNDDGKPVRGEKGELVCTKAFPSMPVMFW NDPDGAKYRAAYFDRFDNVWCHGDFAEWTEHGGLVIHGRSDATLNPGGVRIGTAEIYNQVEQMEEVAEALCIGQEWDDDV RVILFVRLAPGVTLTEDLIKAIKTRIRTGASPRHVPAKIIAVADIPRTKSGKIVELAVREVVHNRPVKNQEALANPEALR LFAGLEELKD >Mature_650_residues MQDNRPLWVPSAEAVARSPIHAFMARCNADFGLSLSGFEDLHAWSVAERENFWSAVWDFCGVKGERGAEVLINGDRMLEA RFFPNATLNFAENLLAGRGDGDAIVFRGEDKAEDRWSWDRLRALVSKLQQAFKAQGIGEGDRIAAMMPNMPETVAAMLAA ASIGAIWSSCSPDFGEQGVLDRFGQIGPKLFIACDAYWYSGKLQDVGPKVAAVAKSLGVPTIVVHYAGDAEAVARATPGA STLETFVAPYQAREVEFTPLAFAHPLYILFSSGTTGVPKCIVHSAGGTLLQHLKEQRLHCGLKAGEKLFYFTTCGWMMWN WLVSGLASGATLCLFDGSPFAPDGNVLFDYAAAENFAIFGTSAKYIDAVRKSGLTPRTSHDLSSLRLMTSTGSPLSPEGF TFVYEGIKADVQLASISGGTDIVSCFVLGNPLQPVWRGEIQGAGLGLAVDVWNDDGKPVRGEKGELVCTKAFPSMPVMFW NDPDGAKYRAAYFDRFDNVWCHGDFAEWTEHGGLVIHGRSDATLNPGGVRIGTAEIYNQVEQMEEVAEALCIGQEWDDDV RVILFVRLAPGVTLTEDLIKAIKTRIRTGASPRHVPAKIIAVADIPRTKSGKIVELAVREVVHNRPVKNQEALANPEALR LFAGLEELKD
Specific function: Involved in poly-3-hydroxybutyrate degradation. Activates acetoacetate to acetoacetyl-CoA [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI31982927, Length=658, Percent_Identity=43.0091185410334, Blast_Score=546, Evalue=1e-155, Organism=Homo sapiens, GI8923896, Length=660, Percent_Identity=26.6666666666667, Blast_Score=178, Evalue=2e-44, Organism=Homo sapiens, GI253970489, Length=673, Percent_Identity=25.7057949479941, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI13375727, Length=645, Percent_Identity=24.8062015503876, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI28416953, Length=588, Percent_Identity=23.8095238095238, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI38505220, Length=520, Percent_Identity=22.8846153846154, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1790505, Length=573, Percent_Identity=26.3525305410122, Blast_Score=164, Evalue=2e-41, Organism=Escherichia coli, GI1786529, Length=650, Percent_Identity=22.4615384615385, Blast_Score=104, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17569507, Length=638, Percent_Identity=38.0877742946708, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI71983001, Length=622, Percent_Identity=23.7942122186495, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71982997, Length=622, Percent_Identity=23.7942122186495, Blast_Score=134, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323182, Length=669, Percent_Identity=25.2615844544096, Blast_Score=170, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6319264, Length=644, Percent_Identity=25.776397515528, Blast_Score=157, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667955, Length=607, Percent_Identity=26.5238879736409, Blast_Score=178, Evalue=8e-45, Organism=Drosophila melanogaster, GI62472339, Length=560, Percent_Identity=26.6071428571429, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24667959, Length=530, Percent_Identity=26.6037735849057, Blast_Score=153, Evalue=4e-37, Organism=Drosophila melanogaster, GI21355225, Length=573, Percent_Identity=23.5602094240838, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005914 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.16 [H]
Molecular weight: Translated: 70640; Mature: 70640
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDNRPLWVPSAEAVARSPIHAFMARCNADFGLSLSGFEDLHAWSVAERENFWSAVWDFC CCCCCCEECCCHHHHHHCHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH GVKGERGAEVLINGDRMLEARFFPNATLNFAENLLAGRGDGDAIVFRGEDKAEDRWSWDR CCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHH LRALVSKLQQAFKAQGIGEGDRIAAMMPNMPETVAAMLAAASIGAIWSSCSPDFGEQGVL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH DRFGQIGPKLFIACDAYWYSGKLQDVGPKVAAVAKSLGVPTIVVHYAGDAEAVARATPGA HHHHCCCCEEEEEEEEEEECCCCHHCCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCH STLETFVAPYQAREVEFTPLAFAHPLYILFSSGTTGVPKCIVHSAGGTLLQHLKEQRLHC HHHHHHHCCCCCCCEEECCCHHHCEEEEEEECCCCCCCHHEEECCCHHHHHHHHHHHHHC GLKAGEKLFYFTTCGWMMWNWLVSGLASGATLCLFDGSPFAPDGNVLFDYAAAENFAIFG CCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEE TSAKYIDAVRKSGLTPRTSHDLSSLRLMTSTGSPLSPEGFTFVYEGIKADVQLASISGGT CCHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCCCEEEEECCCCCEEEEEECCCH DIVSCFVLGNPLQPVWRGEIQGAGLGLAVDVWNDDGKPVRGEKGELVCTKAFPSMPVMFW HHEEEEEECCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEE NDPDGAKYRAAYFDRFDNVWCHGDFAEWTEHGGLVIHGRSDATLNPGGVRIGTAEIYNQV ECCCCCCCHHHHHHHCCCEEECCCHHHHHHCCCEEEECCCCCEECCCCEEEEHHHHHHHH EQMEEVAEALCIGQEWDDDVRVILFVRLAPGVTLTEDLIKAIKTRIRTGASPRHVPAKII HHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEE AVADIPRTKSGKIVELAVREVVHNRPVKNQEALANPEALRLFAGLEELKD EEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MQDNRPLWVPSAEAVARSPIHAFMARCNADFGLSLSGFEDLHAWSVAERENFWSAVWDFC CCCCCCEECCCHHHHHHCHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH GVKGERGAEVLINGDRMLEARFFPNATLNFAENLLAGRGDGDAIVFRGEDKAEDRWSWDR CCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHH LRALVSKLQQAFKAQGIGEGDRIAAMMPNMPETVAAMLAAASIGAIWSSCSPDFGEQGVL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH DRFGQIGPKLFIACDAYWYSGKLQDVGPKVAAVAKSLGVPTIVVHYAGDAEAVARATPGA HHHHCCCCEEEEEEEEEEECCCCHHCCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCH STLETFVAPYQAREVEFTPLAFAHPLYILFSSGTTGVPKCIVHSAGGTLLQHLKEQRLHC HHHHHHHCCCCCCCEEECCCHHHCEEEEEEECCCCCCCHHEEECCCHHHHHHHHHHHHHC GLKAGEKLFYFTTCGWMMWNWLVSGLASGATLCLFDGSPFAPDGNVLFDYAAAENFAIFG CCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEE TSAKYIDAVRKSGLTPRTSHDLSSLRLMTSTGSPLSPEGFTFVYEGIKADVQLASISGGT CCHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCCCEEEEECCCCCEEEEEECCCH DIVSCFVLGNPLQPVWRGEIQGAGLGLAVDVWNDDGKPVRGEKGELVCTKAFPSMPVMFW HHEEEEEECCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEE NDPDGAKYRAAYFDRFDNVWCHGDFAEWTEHGGLVIHGRSDATLNPGGVRIGTAEIYNQV ECCCCCCCHHHHHHHCCCEEECCCHHHHHHCCCEEEECCCCCEECCCCEEEEHHHHHHHH EQMEEVAEALCIGQEWDDDVRVILFVRLAPGVTLTEDLIKAIKTRIRTGASPRHVPAKII HHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEE AVADIPRTKSGKIVELAVREVVHNRPVKNQEALANPEALRLFAGLEELKD EEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10735852; 11481430 [H]