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The map label for this gene is motD [H]

Identifier: 209547943

GI number: 209547943

Start: 339172

End: 340599

Strand: Direct

Name: motD [H]

Synonym: Rleg2_0335

Alternate gene names: 209547943

Gene position: 339172-340599 (Clockwise)

Preceding gene: 209547942

Following gene: 209547944

Centisome position: 7.47

GC content: 64.22

Gene sequence:

>1428_bases
ATGATGGATATGAGCGTCTTGGGCGGAGCCGCCGGTGCGGATCCCGCCGCGGCTGCGAAATCTGCAGGACCGATGAGCAA
AGACGATGCCGCCGGCCAGAAGAACGGCTTCTCCGACGCGCTTGCCAAGGCAAGCAACGACGCCGACGATGCGCAGCCGG
AGCAGGGTGCGGTTACCGATACCGGTACCGAGAAAGTGGCGCGGACGATCCGCAGCCGCAGCGGCGCAAAGCCGTTGATC
GATCTCGGCGACGCCGCTTTGAAGGCACAGGCTGAAGTGCAGCCGGAAACCATCGCCAATGTCGTCGCGGCAAAGCCTGT
AAAGGCTGCAGTCAAGATGCCGGCGGATCTTCCCTTCGGCAAGCTCGACGCGAAGGACAGCTCGGCCGAGGAGGTCGTTC
AGGCGGCCAAAGGCGGCAAGCATGCCAAAGCCGACGCGTTGGAAACCGATACGGACAAGGACAGCGAGGATGACGACGGC
GGCATTTCGGATGTGCTCGGCCTGCTGAAGCAGGATCCTGCCGACGGCGCGGTCGCTTTGTCGGCGGCAGCAGGCGTCCA
TCACGCGTCTGCCCAAGCCGACGACGTCAAGCCGGCCGACAAGAAGATTGAGGGTATCGACGCCAAGGCAGGCGGCTATG
CGTCCGACGCCCTGGCGGCCGTCAGCGGCAACGTCGACAGCGGCAAGGCTGATGAGGTCAAGGTACCCGGATCGGAGAAT
GCCGAAGCCGCCGACGGCAGGACGTTCAGGATCAGCCGCGCCGATGGCCGTGGCGTGTCGATGGACGTCCATCTCGGCAC
GGATCAGGCCGGTTCTCAGGATGGCAAGAAGAAAGCCGATGTCGAAAACGTTTCGGTTCTCGAATCGCGCCGCTATATCG
GCCTGATGCAGAACTCGAATTCCGCCGCAGTCACCGCCGCTCTCTCCGGCGATTCCGAATGGGCGCGCGCCATGGAACCG
AGCTCGGCCCTCTCCAACGCGGCGGAATGGACAAGCACCGGCAAGGTGGTCAATACGCTGAAGATCCAGATGAACCCGCT
CGATCTCGGCATGGTGACGGCGACCATGCGCCTGTCCGGCGACACCCTGAATGTCGACCTCAAGGTCGAAACCGGGGCGG
CTTACCGTCAGATGAAGGAAGATCACGGCAAGATTCTCGAAGCTCTGCGCAGCCAGGGCTACGCCGTCGACAACGTTACC
ATCAGCATGGCGCCGGTCGAGCGTAGCGACGCCGGCAGCCAGGCAGGCAGCCAAGGCCAAGCCTCCCAACAGCAGTCGCT
CGCCCAGCAGGGGCAGGGCGGCGAGGCGCGGGAGCGTCACAATCAGACGGCACAGCGGGCGGACGGAGGCTTCAATGGTG
CAGGCGAGACCGGTATTGAAGACGTTTCTGCTGGCCGCAGCGGCGGCACTGGCGGCGTTTACCTCTGA

Upstream 100 bases:

>100_bases
AGAGCCAGGGTACCGACCCCTCATTCAACGCATTTGTGACGACCAATCGGTCCAAGCTCGACGAGATCGACGGTCTTCTG
GCGCAGGAAGGCAACGAACA

Downstream 100 bases:

>100_bases
GGCGAAAGCCTCCACCGGCGCCTGTGAGCGTGAGATCCAGTCGGCAGCTGCCAAATACGGCATCCCGGAAGGCATCCTCT
ATTCGGTCGGCCTGACGGAG

Product: chemotaxis motility protein

Products: NA

Alternate protein names: Motility protein D [H]

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MMDMSVLGGAAGADPAAAAKSAGPMSKDDAAGQKNGFSDALAKASNDADDAQPEQGAVTDTGTEKVARTIRSRSGAKPLI
DLGDAALKAQAEVQPETIANVVAAKPVKAAVKMPADLPFGKLDAKDSSAEEVVQAAKGGKHAKADALETDTDKDSEDDDG
GISDVLGLLKQDPADGAVALSAAAGVHHASAQADDVKPADKKIEGIDAKAGGYASDALAAVSGNVDSGKADEVKVPGSEN
AEAADGRTFRISRADGRGVSMDVHLGTDQAGSQDGKKKADVENVSVLESRRYIGLMQNSNSAAVTAALSGDSEWARAMEP
SSALSNAAEWTSTGKVVNTLKIQMNPLDLGMVTATMRLSGDTLNVDLKVETGAAYRQMKEDHGKILEALRSQGYAVDNVT
ISMAPVERSDAGSQAGSQGQASQQQSLAQQGQGGEARERHNQTAQRADGGFNGAGETGIEDVSAGRSGGTGGVYL

Sequences:

>Translated_475_residues
MMDMSVLGGAAGADPAAAAKSAGPMSKDDAAGQKNGFSDALAKASNDADDAQPEQGAVTDTGTEKVARTIRSRSGAKPLI
DLGDAALKAQAEVQPETIANVVAAKPVKAAVKMPADLPFGKLDAKDSSAEEVVQAAKGGKHAKADALETDTDKDSEDDDG
GISDVLGLLKQDPADGAVALSAAAGVHHASAQADDVKPADKKIEGIDAKAGGYASDALAAVSGNVDSGKADEVKVPGSEN
AEAADGRTFRISRADGRGVSMDVHLGTDQAGSQDGKKKADVENVSVLESRRYIGLMQNSNSAAVTAALSGDSEWARAMEP
SSALSNAAEWTSTGKVVNTLKIQMNPLDLGMVTATMRLSGDTLNVDLKVETGAAYRQMKEDHGKILEALRSQGYAVDNVT
ISMAPVERSDAGSQAGSQGQASQQQSLAQQGQGGEARERHNQTAQRADGGFNGAGETGIEDVSAGRSGGTGGVYL
>Mature_475_residues
MMDMSVLGGAAGADPAAAAKSAGPMSKDDAAGQKNGFSDALAKASNDADDAQPEQGAVTDTGTEKVARTIRSRSGAKPLI
DLGDAALKAQAEVQPETIANVVAAKPVKAAVKMPADLPFGKLDAKDSSAEEVVQAAKGGKHAKADALETDTDKDSEDDDG
GISDVLGLLKQDPADGAVALSAAAGVHHASAQADDVKPADKKIEGIDAKAGGYASDALAAVSGNVDSGKADEVKVPGSEN
AEAADGRTFRISRADGRGVSMDVHLGTDQAGSQDGKKKADVENVSVLESRRYIGLMQNSNSAAVTAALSGDSEWARAMEP
SSALSNAAEWTSTGKVVNTLKIQMNPLDLGMVTATMRLSGDTLNVDLKVETGAAYRQMKEDHGKILEALRSQGYAVDNVT
ISMAPVERSDAGSQAGSQGQASQQQSLAQQGQGGEARERHNQTAQRADGGFNGAGETGIEDVSAGRSGGTGGVYL

Specific function: Required for the rotation of the flagellar motor. Has a positive effect as flagellar rotation increases when an excess of motd is present [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm. Note=Associated with the inner surface of the motor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 48317; Mature: 48317

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDMSVLGGAAGADPAAAAKSAGPMSKDDAAGQKNGFSDALAKASNDADDAQPEQGAVTD
CCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
TGTEKVARTIRSRSGAKPLIDLGDAALKAQAEVQPETIANVVAAKPVKAAVKMPADLPFG
CCHHHHHHHHHHHCCCCCCHHCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCCC
KLDAKDSSAEEVVQAAKGGKHAKADALETDTDKDSEDDDGGISDVLGLLKQDPADGAVAL
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE
SAAAGVHHASAQADDVKPADKKIEGIDAKAGGYASDALAAVSGNVDSGKADEVKVPGSEN
HHHHCCHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCC
AEAADGRTFRISRADGRGVSMDVHLGTDQAGSQDGKKKADVENVSVLESRRYIGLMQNSN
CCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCC
SAAVTAALSGDSEWARAMEPSSALSNAAEWTSTGKVVNTLKIQMNPLDLGMVTATMRLSG
CEEEEEEECCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEECC
DTLNVDLKVETGAAYRQMKEDHGKILEALRSQGYAVDNVTISMAPVERSDAGSQAGSQGQ
CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCCCCCCCCC
ASQQQSLAQQGQGGEARERHNQTAQRADGGFNGAGETGIEDVSAGRSGGTGGVYL
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MMDMSVLGGAAGADPAAAAKSAGPMSKDDAAGQKNGFSDALAKASNDADDAQPEQGAVTD
CCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
TGTEKVARTIRSRSGAKPLIDLGDAALKAQAEVQPETIANVVAAKPVKAAVKMPADLPFG
CCHHHHHHHHHHHCCCCCCHHCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCCC
KLDAKDSSAEEVVQAAKGGKHAKADALETDTDKDSEDDDGGISDVLGLLKQDPADGAVAL
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE
SAAAGVHHASAQADDVKPADKKIEGIDAKAGGYASDALAAVSGNVDSGKADEVKVPGSEN
HHHHCCHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCC
AEAADGRTFRISRADGRGVSMDVHLGTDQAGSQDGKKKADVENVSVLESRRYIGLMQNSN
CCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCC
SAAVTAALSGDSEWARAMEPSSALSNAAEWTSTGKVVNTLKIQMNPLDLGMVTATMRLSG
CEEEEEEECCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEECC
DTLNVDLKVETGAAYRQMKEDHGKILEALRSQGYAVDNVTISMAPVERSDAGSQAGSQGQ
CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCCCCCCCCC
ASQQQSLAQQGQGGEARERHNQTAQRADGGFNGAGETGIEDVSAGRSGGTGGVYL
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335288 [H]