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The map label for this gene is fliP [H]

Identifier: 209547934

GI number: 209547934

Start: 328008

End: 328745

Strand: Direct

Name: fliP [H]

Synonym: Rleg2_0326

Alternate gene names: 209547934

Gene position: 328008-328745 (Clockwise)

Preceding gene: 209547933

Following gene: 209547936

Centisome position: 7.23

GC content: 60.03

Gene sequence:

>738_bases
ATGATTCGTCTCATAGTTTTCCTTGCCGCCATGATGGCGGTACCGGAACTGGCGGTGGCACAGCAGCTGCCGACTGACTT
GTTGAACGTGCCGGTCGATGGCTCCGTCGCCGCCTGGATCATCCGCACATTCGGCCTGCTGACCATTCTCTCGGTCGCGC
CGGGCATCCTGATCATGGTGACGAGCTTCCCGCGCTTCATCATTGCTTTCTCGATCCTGCGCTCGGGGATGGGCCTCTCC
TCGACCCCCTCCAACATGATCCTCCTGTCGCTGTCGCTGTTCATGACCTTCTACGTCATGTCGCCGACCTTCGATCAGGC
CTGGCAGAACGGCGTGCAGCCGCTCCTTGCCAATCAGATCAACGAGACCGAGGCCGTCCAGCGGATTGCCGAACCCTTCC
GCACTTTCATGGCGGCCAACACCCGCGACAAGGATCTGGCGCTTTTCGTCGATCTGGCGCGTGAACGCGGACAGACTATC
CAGACGACCGATCCGATCGACTATCGCGTGCTGATCCCGGCCTTCATGATTTCGGAGATTCGCCGCGGTTTCGAGATCGG
CTTCCTCGTCGTCCTGCCGTTCCTCGTCATCGACCTTATCGTCGCCACCATCACCATGGCGATGGGCATGATGATGCTGC
CGCCGACCTCGATCTCGCTGCCGTTCAAGATTCTCTTCTTCGTGCTGATCGACGGCTGGAACCTGCTGGTCGGCAGTCTG
GTGCGCTCGTTCAACTGA

Upstream 100 bases:

>100_bases
CGCGGGGCTTTCAATATCTCAAGGATGACATACAGGAACGTGTTGACCTTCGCTCGCAAGGGCGGGTATCGAAGGTCATG
TTCAGGACATTTGTCATCGA

Downstream 100 bases:

>100_bases
CCGGCCGCCGCTCCTGTCTTATCTTCACCCAGGTCTTCGCCAGTGAGAAAAACCCGCCGGATCGCTCCGGCGGGTTTTTC
GTGACGAATGAAAAGCTTAC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MIRLIVFLAAMMAVPELAVAQQLPTDLLNVPVDGSVAAWIIRTFGLLTILSVAPGILIMVTSFPRFIIAFSILRSGMGLS
STPSNMILLSLSLFMTFYVMSPTFDQAWQNGVQPLLANQINETEAVQRIAEPFRTFMAANTRDKDLALFVDLARERGQTI
QTTDPIDYRVLIPAFMISEIRRGFEIGFLVVLPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
VRSFN

Sequences:

>Translated_245_residues
MIRLIVFLAAMMAVPELAVAQQLPTDLLNVPVDGSVAAWIIRTFGLLTILSVAPGILIMVTSFPRFIIAFSILRSGMGLS
STPSNMILLSLSLFMTFYVMSPTFDQAWQNGVQPLLANQINETEAVQRIAEPFRTFMAANTRDKDLALFVDLARERGQTI
QTTDPIDYRVLIPAFMISEIRRGFEIGFLVVLPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
VRSFN
>Mature_245_residues
MIRLIVFLAAMMAVPELAVAQQLPTDLLNVPVDGSVAAWIIRTFGLLTILSVAPGILIMVTSFPRFIIAFSILRSGMGLS
STPSNMILLSLSLFMTFYVMSPTFDQAWQNGVQPLLANQINETEAVQRIAEPFRTFMAANTRDKDLALFVDLARERGQTI
QTTDPIDYRVLIPAFMISEIRRGFEIGFLVVLPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
VRSFN

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=225, Percent_Identity=44.4444444444444, Blast_Score=202, Evalue=2e-53,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27195; Mature: 27195

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLIVFLAAMMAVPELAVAQQLPTDLLNVPVDGSVAAWIIRTFGLLTILSVAPGILIMV
CHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHH
TSFPRFIIAFSILRSGMGLSSTPSNMILLSLSLFMTFYVMSPTFDQAWQNGVQPLLANQI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHC
NETEAVQRIAEPFRTFMAANTRDKDLALFVDLARERGQTIQTTDPIDYRVLIPAFMISEI
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHH
RRGFEIGFLVVLPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
VRSFN
HHHCC
>Mature Secondary Structure
MIRLIVFLAAMMAVPELAVAQQLPTDLLNVPVDGSVAAWIIRTFGLLTILSVAPGILIMV
CHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHH
TSFPRFIIAFSILRSGMGLSSTPSNMILLSLSLFMTFYVMSPTFDQAWQNGVQPLLANQI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHC
NETEAVQRIAEPFRTFMAANTRDKDLALFVDLARERGQTIQTTDPIDYRVLIPAFMISEI
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHH
RRGFEIGFLVVLPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
VRSFN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161424; 11743193; 11743194 [H]