BacMap

Definition	Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession	NC_011369
Length	4,537,948

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The map label for this gene is fabG [H]

Identifier: 209547862

GI number: 209547862

Start: 258566

End: 259291

Strand: Reverse

Name: fabG [H]

Synonym: Rleg2_0253

Alternate gene names: 209547862

Gene position: 259291-258566 (Counterclockwise)

Preceding gene: 209547863

Following gene: 209547860

Centisome position: 5.71

GC content: 64.88

Gene sequence:

>726_bases
ATGGACTTCAATGGAAAGACGGTCATCGTTACCGGGGCGGGAAAAGGCATCGGCCGCGAAATTGCCCGGATGCTCGTCGA
ACGGGGTGCGGATGTCGTTGCCCTGACCCGCAGTGCCGCCGACGTCGACGCGCTGCGAGAGGAAGCCGGCTGCCGCGCCA
TCCAAGTCGATCTCGCCGACGTGGATGCGACGAGGAAGGCGGCGATCGCGGCCCTGCCGGCGGATTTCCTGATCAACTGC
GCCGGCACGACCGAACTCCAGCCGTTCCTGGAGACGACGGTCGAAGCATTCGACCGTCTTGTCGCGGTCAACACACGTGC
GCCGATGATCGTGGCGCAGGAATATGCCCGCTTCCTGATCAAGGAGGGCCGCAAAGGCGCCATCGTCAACGTCTCGTCGG
TCGCATCGTTTGTCGGCATCCCAGACCACGCCGCCTATTGTGCGTCGAAAGGTGGGCTGGATGGCTTGACGCGGGTCATG
GCGAAGGAACTTGCGCCGCACGGCATCCGCGCGAACGGCGTGCACCCAACGGTGACGCTGACGCCGATGGCGGTGAAGGC
CTGGAGCGATCCCGAGAAGGCCGCCGGAATGATGCAGCGCATCCCCGTCGGCCGCTTCGCCGAACCGAGCGACGTCGCCG
AAGTCGTGCTCTTCCTGCTGTCGGATGAGGCGGCGATGGTGAACGGGATATCGATGCCGGTGGACGGCGGCTACATGATT
GCCTGA

Upstream 100 bases:

>100_bases
ATCGAGGTCGATCCCGGACGGACGGTGTATTTCCACATCGATCCCCGGCGGGCACATATCTTCGATCGGGAAACAGGCCA
GAGACTGTAAGGAGACAACC

Downstream 100 bases:

>100_bases
GATCGACAGCTGCGCGAAGATCTACTGCACCAATCGCCGCAACTGTTCCTGATCGACAAAGTGATCCGTCACCCCGGCCT
CTTTATCCGGGTGACTGAAA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MDFNGKTVIVTGAGKGIGREIARMLVERGADVVALTRSAADVDALREEAGCRAIQVDLADVDATRKAAIAALPADFLINC
AGTTELQPFLETTVEAFDRLVAVNTRAPMIVAQEYARFLIKEGRKGAIVNVSSVASFVGIPDHAAYCASKGGLDGLTRVM
AKELAPHGIRANGVHPTVTLTPMAVKAWSDPEKAAGMMQRIPVGRFAEPSDVAEVVLFLLSDEAAMVNGISMPVDGGYMI
A

Sequences:

>Translated_241_residues
MDFNGKTVIVTGAGKGIGREIARMLVERGADVVALTRSAADVDALREEAGCRAIQVDLADVDATRKAAIAALPADFLINC
AGTTELQPFLETTVEAFDRLVAVNTRAPMIVAQEYARFLIKEGRKGAIVNVSSVASFVGIPDHAAYCASKGGLDGLTRVM
AKELAPHGIRANGVHPTVTLTPMAVKAWSDPEKAAGMMQRIPVGRFAEPSDVAEVVLFLLSDEAAMVNGISMPVDGGYMI
A
>Mature_241_residues
MDFNGKTVIVTGAGKGIGREIARMLVERGADVVALTRSAADVDALREEAGCRAIQVDLADVDATRKAAIAALPADFLINC
AGTTELQPFLETTVEAFDRLVAVNTRAPMIVAQEYARFLIKEGRKGAIVNVSSVASFVGIPDHAAYCASKGGLDGLTRVM
AKELAPHGIRANGVHPTVTLTPMAVKAWSDPEKAAGMMQRIPVGRFAEPSDVAEVVLFLLSDEAAMVNGISMPVDGGYMI
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=235, Percent_Identity=51.9148936170213, Blast_Score=231, Evalue=4e-61,
Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=35.4581673306773, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=31.5352697095436, Blast_Score=98, Evalue=6e-21,
Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=31.1203319502075, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=29.3650793650794, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI66933014, Length=248, Percent_Identity=30.241935483871, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=28.2258064516129, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI4758504, Length=252, Percent_Identity=30.952380952381, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI33667109, Length=186, Percent_Identity=32.7956989247312, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=28.4552845528455, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=28.8617886178862, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI83715985, Length=252, Percent_Identity=29.7619047619048, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4503817, Length=192, Percent_Identity=30.7291666666667, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI20149619, Length=226, Percent_Identity=28.7610619469027, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI31542939, Length=259, Percent_Identity=29.3436293436293, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=27.3913043478261, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7706318, Length=183, Percent_Identity=26.775956284153, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI126723191, Length=208, Percent_Identity=30.2884615384615, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4503301, Length=254, Percent_Identity=26.7716535433071, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI186928839, Length=207, Percent_Identity=31.8840579710145, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=32.1138211382114, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=33.1983805668016, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=32.9268292682927, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=31.7073170731707, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082160, Length=254, Percent_Identity=30.7086614173228, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=32.6693227091633, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=34.0163934426229, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=32.8063241106719, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=32.0987654320988, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=29.0983606557377, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789057, Length=195, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787526, Length=251, Percent_Identity=25.8964143426295, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=41.5637860082305, Blast_Score=189, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=32.2448979591837, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=31.404958677686, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=30.3643724696356, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=30.3643724696356, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=30.8300395256917, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=32.5670498084291, Blast_Score=98, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=32.4324324324324, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=31.2977099236641, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=30.4832713754647, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=29.8850574712644, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=30.3846153846154, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=31.1538461538462, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=29.1187739463602, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=31.2977099236641, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17562908, Length=260, Percent_Identity=29.2307692307692, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=30.6513409961686, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=31.1787072243346, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=29.2307692307692, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71982365, Length=212, Percent_Identity=28.7735849056604, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=27.4509803921569, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=251, Percent_Identity=27.8884462151394, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=255, Percent_Identity=25.8823529411765, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=27.0916334661355, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=29.1666666666667, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=27.9693486590038, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=27.4809160305344, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=26.4367816091954, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17558628, Length=214, Percent_Identity=29.4392523364486, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=174, Percent_Identity=29.8850574712644, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193203117, Length=175, Percent_Identity=29.1428571428571, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193207185, Length=144, Percent_Identity=34.7222222222222, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17508651, Length=246, Percent_Identity=28.4552845528455, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6319635, Length=185, Percent_Identity=28.1081081081081, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=26.8774703557312, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6322861, Length=192, Percent_Identity=28.6458333333333, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322067, Length=174, Percent_Identity=30.4597701149425, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=38.9344262295082, Blast_Score=160, Evalue=9e-40,
Organism=Drosophila melanogaster, GI24639444, Length=242, Percent_Identity=33.8842975206612, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=33.739837398374, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=37.5494071146245, Blast_Score=124, Evalue=6e-29,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=33.7301587301587, Blast_Score=114, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=34.6456692913386, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=30.6122448979592, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24644337, Length=170, Percent_Identity=32.9411764705882, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI17737361, Length=248, Percent_Identity=30.6451612903226, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24584752, Length=184, Percent_Identity=28.2608695652174, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281364892, Length=200, Percent_Identity=29, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161076933, Length=205, Percent_Identity=28.780487804878, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584748, Length=205, Percent_Identity=28.780487804878, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21357673, Length=208, Percent_Identity=28.3653846153846, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24580925, Length=166, Percent_Identity=27.710843373494, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25354; Mature: 25354

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFNGKTVIVTGAGKGIGREIARMLVERGADVVALTRSAADVDALREEAGCRAIQVDLAD
CCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCEEEEEEEHH
VDATRKAAIAALPADFLINCAGTTELQPFLETTVEAFDRLVAVNTRAPMIVAQEYARFLI
CCCHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
KEGRKGAIVNVSSVASFVGIPDHAAYCASKGGLDGLTRVMAKELAPHGIRANGVHPTVTL
HCCCCCCEEEHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEE
TPMAVKAWSDPEKAAGMMQRIPVGRFAEPSDVAEVVLFLLSDEAAMVNGISMPVDGGYMI
CCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEE
A
C
>Mature Secondary Structure
MDFNGKTVIVTGAGKGIGREIARMLVERGADVVALTRSAADVDALREEAGCRAIQVDLAD
CCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCEEEEEEEHH
VDATRKAAIAALPADFLINCAGTTELQPFLETTVEAFDRLVAVNTRAPMIVAQEYARFLI
CCCHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
KEGRKGAIVNVSSVASFVGIPDHAAYCASKGGLDGLTRVMAKELAPHGIRANGVHPTVTL
HCCCCCCEEEHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEE
TPMAVKAWSDPEKAAGMMQRIPVGRFAEPSDVAEVVLFLLSDEAAMVNGISMPVDGGYMI
CCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEE
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]