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The map label for this gene is yfiK [H]

Identifier: 209547859

GI number: 209547859

Start: 254938

End: 255720

Strand: Direct

Name: yfiK [H]

Synonym: Rleg2_0250

Alternate gene names: 209547859

Gene position: 254938-255720 (Clockwise)

Preceding gene: 209547858

Following gene: 209547861

Centisome position: 5.62

GC content: 57.22

Gene sequence:

>783_bases
ATGAATGACTGTTGGGTTGCACACAATCTGGGGAGCACGCAGGTGTCCGACAGTGCTGGAACAAAGCGCCGGCGCAATGC
ACCAACTGTGATCATTATTGAGCATTCTACACTGGCGCGCACGACCGTGGTGAAGCTACTTGAGCGGGAACTCGCCGGGT
GGAACTTGATCGATTTGAGTTCGACCGAGAGTCTCGATCGGGCGCTTGGAGCCGAGGTGCGTTTGATCGCATTGGATCTG
GCCGGCCGAGGTGTCGAGAGCGCCAGCCTGCGGGATGATCTCGCCGCGATTACCGCACGTTTTCCCGAAGTTCCTATCAC
GTTGCTCTCAAGTACGGATGACGCCATCATTGCCCGTCAGGCGCTCAAGATCGGCATACGCGGCTTTTTCTCGACGTCCC
TTCCCATCGACATTGCTCTTGCCGGCCTTCGCCTTGTCCTGGCAGGAGGAACATTTTTCCCACAGCTTTTGGGGGCAGCT
ACAAACGGCTCAAACGGCTCAAACGAGCATAGTCCGGCCAGAAACGAGGCCGAAAAAAGCTTGGATGAGCGGACGCAATA
CTTGGCGCTCGCCGAGTTCACGCCCCGCGAAGCGGATGTCCTCGCAGAGTTGCAATCCGGCTGCTCAAATAAGGTCATTG
CAGGAAAACTCAATTTGTCGGGGCATACGGTGAAGATGCATCTGCAACACATCATGCGAAAGCTGCAGGCGCAGAACCGG
ACTGAAGTGGTTGCCCGCTTGATCCAAAGAGCCGCCAGCGGGCCTGACGCCTCGCCGAGTTAG

Upstream 100 bases:

>100_bases
GAAATCTTATAGGCTATAATAATTATCCTGAGAGATCAGACTATTAATATCGGCAATACACTCGCTTTTTCTCATGACAT
GTCGCAAGAACAGGAATAGT

Downstream 100 bases:

>100_bases
GCGGTGTCGCCGGTGCCGGGAACTGTCTCAACGTTTTAGCTGGATTTCCGAGTGCGGCTTGACCCCGCCATGGGCGCCGA
AGAATGCTCCCTTACTCGAA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNDCWVAHNLGSTQVSDSAGTKRRRNAPTVIIIEHSTLARTTVVKLLERELAGWNLIDLSSTESLDRALGAEVRLIALDL
AGRGVESASLRDDLAAITARFPEVPITLLSSTDDAIIARQALKIGIRGFFSTSLPIDIALAGLRLVLAGGTFFPQLLGAA
TNGSNGSNEHSPARNEAEKSLDERTQYLALAEFTPREADVLAELQSGCSNKVIAGKLNLSGHTVKMHLQHIMRKLQAQNR
TEVVARLIQRAASGPDASPS

Sequences:

>Translated_260_residues
MNDCWVAHNLGSTQVSDSAGTKRRRNAPTVIIIEHSTLARTTVVKLLERELAGWNLIDLSSTESLDRALGAEVRLIALDL
AGRGVESASLRDDLAAITARFPEVPITLLSSTDDAIIARQALKIGIRGFFSTSLPIDIALAGLRLVLAGGTFFPQLLGAA
TNGSNGSNEHSPARNEAEKSLDERTQYLALAEFTPREADVLAELQSGCSNKVIAGKLNLSGHTVKMHLQHIMRKLQAQNR
TEVVARLIQRAASGPDASPS
>Mature_260_residues
MNDCWVAHNLGSTQVSDSAGTKRRRNAPTVIIIEHSTLARTTVVKLLERELAGWNLIDLSSTESLDRALGAEVRLIALDL
AGRGVESASLRDDLAAITARFPEVPITLLSSTDDAIIARQALKIGIRGFFSTSLPIDIALAGLRLVLAGGTFFPQLLGAA
TNGSNGSNEHSPARNEAEKSLDERTQYLALAEFTPREADVLAELQSGCSNKVIAGKLNLSGHTVKMHLQHIMRKLQAQNR
TEVVARLIQRAASGPDASPS

Specific function: Member of the two-component regulatory system yfiJ/yfiK [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 27864; Mature: 27864

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDCWVAHNLGSTQVSDSAGTKRRRNAPTVIIIEHSTLARTTVVKLLERELAGWNLIDLS
CCCCEEEECCCCCCCCCCCCCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEECC
STESLDRALGAEVRLIALDLAGRGVESASLRDDLAAITARFPEVPITLLSSTDDAIIARQ
CHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH
ALKIGIRGFFSTSLPIDIALAGLRLVLAGGTFFPQLLGAATNGSNGSNEHSPARNEAEKS
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LDERTQYLALAEFTPREADVLAELQSGCSNKVIAGKLNLSGHTVKMHLQHIMRKLQAQNR
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCH
TEVVARLIQRAASGPDASPS
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNDCWVAHNLGSTQVSDSAGTKRRRNAPTVIIIEHSTLARTTVVKLLERELAGWNLIDLS
CCCCEEEECCCCCCCCCCCCCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEECC
STESLDRALGAEVRLIALDLAGRGVESASLRDDLAAITARFPEVPITLLSSTDDAIIARQ
CHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH
ALKIGIRGFFSTSLPIDIALAGLRLVLAGGTFFPQLLGAATNGSNGSNEHSPARNEAEKS
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LDERTQYLALAEFTPREADVLAELQSGCSNKVIAGKLNLSGHTVKMHLQHIMRKLQAQNR
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCH
TEVVARLIQRAASGPDASPS
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]