| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is hisD [H]
Identifier: 209547848
GI number: 209547848
Start: 244671
End: 245969
Strand: Direct
Name: hisD [H]
Synonym: Rleg2_0239
Alternate gene names: 209547848
Gene position: 244671-245969 (Clockwise)
Preceding gene: 209547847
Following gene: 209547849
Centisome position: 5.39
GC content: 64.74
Gene sequence:
>1299_bases TTGGCAATCTGGCTGGATCAGGCATCGGAAGGTTTCGAGCAGCGTTTTGCCACCTTTCTGACGACGAAGCGTGAAGTCTC CGAGGATGTGAACACCGTCGTTCGCGCCATCATCGATGATGTCAGGGCCCGCGGCGATGTGGCGCTTGCCGAATATTCGT TGAAGTTCGACGGCATCGATTTCGCCACCGTGCCGATGCGCGTCACGCCTGAGGAGTTCGACGCCGCGATCGAGGCCGTG CCTCCGGAAGTGCTGGGTGCGCTGAAGCTCGCAGCACTGCGCATTGAATCCCATCATCGCCGGCAGCTGCCGAAGGACGA TATTTATGAGGACGACATGGGCGTCGGCCTCGGCTCGCGCTGGACGGCGATCGAGGCGGTCGGGCTCTATGTTCCGGGCG GCACCGCGAGTTATCCGAGCTCGGTGCTGATGAATGCCGTGCCGGCCAAGGTTGCAGGCGTCGATCGCATCGTCATCGCC GTTCCCGCCACCGGCGGTGCCGTCAATCCGGCGGTGCTTGCCGCCGCCAGGCTTGTCGGTGTGACCGAGGTTTATCGTGT CGGCGGCGCCCAGGCGATCGCGGCTCTTGCCTATGGCACCGAGACGATCGCCCCGGTTGCCAAGATCACCGGTCCCGGCA ATGCCTATGTCGCAGCCGCCAAGCGCCATGTCTTCGGCACTGTCGGCATCGATATGATCGCCGGCCCTTCCGAAGTGCTC GTCATCGCCGACAAGGACAACAATCCCGATTGGATCGCCGCCGACCTGCTGGCGCAGGCCGAGCACGATGCCAGCGCCCA GGCGATCCTGATCACCGACGATGCCGAATTCGGCAAGGCGGTGGAGCAGGCGGTCGAGCGCCAGCTGAAGACGCTGAACC GTGCCGAGACCGCCGCGGCAAGCTGGCGCGATTTCGGCGCGGTCATTCTCGTTGCCGATCTGAAGCAGGCCATTCCGCTT GCCAACCGCATCGCCGCCGAGCATCTGGAGCTTGCCGTCGCCGATCCGGATCGGCTGCTCGACGGCATCCGCAATGCCGG CGCGATCTTCATCGGCGCTCATACGCCCGAGGTGATCGGCGATTATGTCGGCGGGTCCAACCACGTGCTGCCGACGGCGC GCTCGGCGCGTTTCTCCTCCGGCCTTTCGGTGCTCGATTTCGTCAAGCGCACCTCGATCCTGCGGCTCGGCCCGCAGCAA TTGCGCACCCTCGGCCCGGCGGCGATTGCTCTAGCCGTCTCCGAAGGCCTCGATGCTCATGCGCGATCGGTTGCGATCCG CCTCAACCTCGAAAGGTGA
Upstream 100 bases:
>100_bases GCCTGGGAGGCCTCCTCCAAGCCTCGCCACCTCTGACGTCGCTGACGCAGGCGCTTGAGGTTTGAACATCGCAGTTTCGA GTTGAGAAGGAATATCGGCC
Downstream 100 bases:
>100_bases GGGGATGGCGGCGGGCGATTTCCGGCTTTGCGACGTCGTCCTCGACGATACGATCGGCCGTTCGACGCCCGATGTCGAGC ATGAGCGCGCCGTCGCCATC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 1 [H]
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MAIWLDQASEGFEQRFATFLTTKREVSEDVNTVVRAIIDDVRARGDVALAEYSLKFDGIDFATVPMRVTPEEFDAAIEAV PPEVLGALKLAALRIESHHRRQLPKDDIYEDDMGVGLGSRWTAIEAVGLYVPGGTASYPSSVLMNAVPAKVAGVDRIVIA VPATGGAVNPAVLAAARLVGVTEVYRVGGAQAIAALAYGTETIAPVAKITGPGNAYVAAAKRHVFGTVGIDMIAGPSEVL VIADKDNNPDWIAADLLAQAEHDASAQAILITDDAEFGKAVEQAVERQLKTLNRAETAAASWRDFGAVILVADLKQAIPL ANRIAAEHLELAVADPDRLLDGIRNAGAIFIGAHTPEVIGDYVGGSNHVLPTARSARFSSGLSVLDFVKRTSILRLGPQQ LRTLGPAAIALAVSEGLDAHARSVAIRLNLER
Sequences:
>Translated_432_residues MAIWLDQASEGFEQRFATFLTTKREVSEDVNTVVRAIIDDVRARGDVALAEYSLKFDGIDFATVPMRVTPEEFDAAIEAV PPEVLGALKLAALRIESHHRRQLPKDDIYEDDMGVGLGSRWTAIEAVGLYVPGGTASYPSSVLMNAVPAKVAGVDRIVIA VPATGGAVNPAVLAAARLVGVTEVYRVGGAQAIAALAYGTETIAPVAKITGPGNAYVAAAKRHVFGTVGIDMIAGPSEVL VIADKDNNPDWIAADLLAQAEHDASAQAILITDDAEFGKAVEQAVERQLKTLNRAETAAASWRDFGAVILVADLKQAIPL ANRIAAEHLELAVADPDRLLDGIRNAGAIFIGAHTPEVIGDYVGGSNHVLPTARSARFSSGLSVLDFVKRTSILRLGPQQ LRTLGPAAIALAVSEGLDAHARSVAIRLNLER >Mature_431_residues AIWLDQASEGFEQRFATFLTTKREVSEDVNTVVRAIIDDVRARGDVALAEYSLKFDGIDFATVPMRVTPEEFDAAIEAVP PEVLGALKLAALRIESHHRRQLPKDDIYEDDMGVGLGSRWTAIEAVGLYVPGGTASYPSSVLMNAVPAKVAGVDRIVIAV PATGGAVNPAVLAAARLVGVTEVYRVGGAQAIAALAYGTETIAPVAKITGPGNAYVAAAKRHVFGTVGIDMIAGPSEVLV IADKDNNPDWIAADLLAQAEHDASAQAILITDDAEFGKAVEQAVERQLKTLNRAETAAASWRDFGAVILVADLKQAIPLA NRIAAEHLELAVADPDRLLDGIRNAGAIFIGAHTPEVIGDYVGGSNHVLPTARSARFSSGLSVLDFVKRTSILRLGPQQL RTLGPAAIALAVSEGLDAHARSVAIRLNLER
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=429, Percent_Identity=41.958041958042, Blast_Score=297, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6319819, Length=414, Percent_Identity=40.5797101449275, Blast_Score=275, Evalue=8e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45606; Mature: 45475
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIWLDQASEGFEQRFATFLTTKREVSEDVNTVVRAIIDDVRARGDVALAEYSLKFDGID CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCC FATVPMRVTPEEFDAAIEAVPPEVLGALKLAALRIESHHRRQLPKDDIYEDDMGVGLGSR EEEECEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WTAIEAVGLYVPGGTASYPSSVLMNAVPAKVAGVDRIVIAVPATGGAVNPAVLAAARLVG CEEEEEEEEEECCCCCCCCHHHHHHHCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHH VTEVYRVGGAQAIAALAYGTETIAPVAKITGPGNAYVAAAKRHVFGTVGIDMIAGPSEVL HHHHHHCCCHHHHHHHHHCCHHHCCHHEECCCCCEEEEEHHHHEEEECCCEEECCCCEEE VIADKDNNPDWIAADLLAQAEHDASAQAILITDDAEFGKAVEQAVERQLKTLNRAETAAA EEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH SWRDFGAVILVADLKQAIPLANRIAAEHLELAVADPDRLLDGIRNAGAIFIGAHTPEVIG HHHHCCCEEEEEHHHHHCCHHHHHHHHHHEEEECCHHHHHHHHCCCCEEEEECCCHHHHH DYVGGSNHVLPTARSARFSSGLSVLDFVKRTSILRLGPQQLRTLGPAAIALAVSEGLDAH HHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCCCC ARSVAIRLNLER CEEEEEEEEECC >Mature Secondary Structure AIWLDQASEGFEQRFATFLTTKREVSEDVNTVVRAIIDDVRARGDVALAEYSLKFDGID EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCC FATVPMRVTPEEFDAAIEAVPPEVLGALKLAALRIESHHRRQLPKDDIYEDDMGVGLGSR EEEECEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WTAIEAVGLYVPGGTASYPSSVLMNAVPAKVAGVDRIVIAVPATGGAVNPAVLAAARLVG CEEEEEEEEEECCCCCCCCHHHHHHHCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHH VTEVYRVGGAQAIAALAYGTETIAPVAKITGPGNAYVAAAKRHVFGTVGIDMIAGPSEVL HHHHHHCCCHHHHHHHHHCCHHHCCHHEECCCCCEEEEEHHHHEEEECCCEEECCCCEEE VIADKDNNPDWIAADLLAQAEHDASAQAILITDDAEFGKAVEQAVERQLKTLNRAETAAA EEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH SWRDFGAVILVADLKQAIPLANRIAAEHLELAVADPDRLLDGIRNAGAIFIGAHTPEVIG HHHHCCCEEEEEHHHHHCCHHHHHHHHHHEEEECCHHHHHHHHCCCCEEEEECCCHHHHH DYVGGSNHVLPTARSARFSSGLSVLDFVKRTSILRLGPQQLRTLGPAAIALAVSEGLDAH HHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCCCC ARSVAIRLNLER CEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]