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The map label for this gene is yffB [H]

Identifier: 209547809

GI number: 209547809

Start: 198895

End: 199395

Strand: Reverse

Name: yffB [H]

Synonym: Rleg2_0200

Alternate gene names: 209547809

Gene position: 199395-198895 (Counterclockwise)

Preceding gene: 209547813

Following gene: 209547808

Centisome position: 4.39

GC content: 65.07

Gene sequence:

>501_bases
ATGAAGATGAGCGATGGCGTCGAGCAGGCCATTCACAGCGTTGCGATGCTTGCCGGCCTCTCCGAAGGCGGCGTGCTTTC
GGCCGCGGCACTGGCGGAATTCCACGGTGTGTCGACGAGCTATCTGCTGAAACATCTGCAGGCGCTCTCGGGCGCCGGCA
TCCTCGACACCGTGCCAGGACCGCGGGGCGGATATAGACTGGCGAAGGCGCCGGAAGAGATTTCGCTGCTCGACATCCTG
CTCGCCGTTGAAGGGCCGGCGCCGGCTTTCCGCTGCGCCGAAATCCGCCAGCGCGGGCCGAACCCGGTCTCCGACCGGCT
CTTCGCCAAGCCCTGCAACATCAGCGCGGCGATGCTCCGGGCCGAACGGGTCTATCGGGCCGAACTCGCCAAGACCAGCA
TTGCCGATCTCGGCATCGAATTGACCGCTATCGACGACGGATCGATCGCAGCCCGAGGCTGCGCCTTCCTGGAAATCCAT
GAACGCAAGACGGCTCGCTGA

Upstream 100 bases:

>100_bases
TATCCGCCGTCGCGATAAAGGCAAGCGGCAAGCAGCAGGGCAGGTCTTGACAACCGGCATAATCATGGATATTTTTTATC
CACGATAGGAGATCGTTTCG

Downstream 100 bases:

>100_bases
GCCACAACAAAGGAGAAGACCATGCAACCGCGTTTCAACTTCGCCAAAGCCGCCCCCGATGCCTACAAGGCGGTCGCCGC
ACTCGAGCAGTACGTCCAGT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKMSDGVEQAIHSVAMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQALSGAGILDTVPGPRGGYRLAKAPEEISLLDIL
LAVEGPAPAFRCAEIRQRGPNPVSDRLFAKPCNISAAMLRAERVYRAELAKTSIADLGIELTAIDDGSIAARGCAFLEIH
ERKTAR

Sequences:

>Translated_166_residues
MKMSDGVEQAIHSVAMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQALSGAGILDTVPGPRGGYRLAKAPEEISLLDIL
LAVEGPAPAFRCAEIRQRGPNPVSDRLFAKPCNISAAMLRAERVYRAELAKTSIADLGIELTAIDDGSIAARGCAFLEIH
ERKTAR
>Mature_166_residues
MKMSDGVEQAIHSVAMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQALSGAGILDTVPGPRGGYRLAKAPEEISLLDIL
LAVEGPAPAFRCAEIRQRGPNPVSDRLFAKPCNISAAMLRAERVYRAELAKTSIADLGIELTAIDDGSIAARGCAFLEIH
ERKTAR

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17493; Mature: 17493

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSDGVEQAIHSVAMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQALSGAGILDTVPG
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCC
PRGGYRLAKAPEEISLLDILLAVEGPAPAFRCAEIRQRGPNPVSDRLFAKPCNISAAMLR
CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHH
AERVYRAELAKTSIADLGIELTAIDDGSIAARGCAFLEIHERKTAR
HHHHHHHHHHHHHHHHCCEEEEEECCCCCHHCCEEEEEECCCCCCC
>Mature Secondary Structure
MKMSDGVEQAIHSVAMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQALSGAGILDTVPG
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCC
PRGGYRLAKAPEEISLLDILLAVEGPAPAFRCAEIRQRGPNPVSDRLFAKPCNISAAMLR
CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHH
AERVYRAELAKTSIADLGIELTAIDDGSIAARGCAFLEIHERKTAR
HHHHHHHHHHHHHHHHCCEEEEEECCCCCHHCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7773380; 11337471 [H]