Click here to switch to the map view.

The map label for this gene is fucU [H]

Identifier: 209547763

GI number: 209547763

Start: 148926

End: 149375

Strand: Reverse

Name: fucU [H]

Synonym: Rleg2_0152

Alternate gene names: 209547763

Gene position: 149375-148926 (Counterclockwise)

Preceding gene: 209547764

Following gene: 209547762

Centisome position: 3.29

GC content: 63.33

Gene sequence:

>450_bases
ATGCTCAAGGGTATTCATCCGCTGCTCGGCCCCGACCTGCTCCACGCGTTGAAGACGATGGGACATGGCGACGACATCGT
CATCGCGGACGCCAATTTCCCCTCTGGTTCGATGGGCCCGCCGGTCATTCGCGCCGACGGCGTCAGCGCCACCGACATGG
CCGAGGCGATCCTCGCCCACATGCCGCTCGACACTTTCGTGCCTGAGACAGCCTGGCGGATGGAGGTGGTCGGCGACCCG
CAAGCCGTGCCGGAGGTCTGCGCCGAGTTCCAAAAGATCGTTTCCCGGCGCGCCGGCGATTTTGCGATCGTGCCGGTCGA
GCGTTTCGCCTTCTACGCGATGGCCCGCAAGGCTGCCTATATCGTCGCAACGACGGAATTCCGGCTCTACGGCAACCTGA
TTTTGAAAAAGGGCGTCGTGCATCCGCATGAGGTCGATCTCGGCCAGTAG

Upstream 100 bases:

>100_bases
CGAGCCGCGGCTTGCCGATGAGATCTATGCCGAATTCGAGCCCTATACGCTGGTCGCGCCGCCGCTCGGCGCCGAAGCTG
TCCGGGTCTGAGGAGACACT

Downstream 100 bases:

>100_bases
CTATTTTAGGCTATCGTTGTATTGGAATAAAATCAGTTGCTTGGGAGGATTTTACCAAAGCAAAAAAGCCGGATCGGCAC
TCTTGCAATTTGATTGCGCC

Product: RbsD or FucU transport

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAHMPLDTFVPETAWRMEVVGDP
QAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKAAYIVATTEFRLYGNLILKKGVVHPHEVDLGQ

Sequences:

>Translated_149_residues
MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAHMPLDTFVPETAWRMEVVGDP
QAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKAAYIVATTEFRLYGNLILKKGVVHPHEVDLGQ
>Mature_149_residues
MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAHMPLDTFVPETAWRMEVVGDP
QAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKAAYIVATTEFRLYGNLILKKGVVHPHEVDLGQ

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=145, Percent_Identity=47.5862068965517, Blast_Score=121, Evalue=2e-28,
Organism=Homo sapiens, GI148596951, Length=129, Percent_Identity=44.9612403100775, Blast_Score=100, Evalue=5e-22,
Organism=Escherichia coli, GI1789169, Length=140, Percent_Identity=46.4285714285714, Blast_Score=118, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 16149; Mature: 16149

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAH
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHH
MPLDTFVPETAWRMEVVGDPQAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKAAY
CCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCEE
IVATTEFRLYGNLILKKGVVHPHEVDLGQ
EEEEEHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAH
CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHH
MPLDTFVPETAWRMEVVGDPQAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKAAY
CCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCEE
IVATTEFRLYGNLILKKGVVHPHEVDLGQ
EEEEEHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA