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The map label for this gene is yedQ [H]

Identifier: 209547741

GI number: 209547741

Start: 122474

End: 123652

Strand: Direct

Name: yedQ [H]

Synonym: Rleg2_0130

Alternate gene names: 209547741

Gene position: 122474-123652 (Clockwise)

Preceding gene: 209547740

Following gene: 209547742

Centisome position: 2.7

GC content: 66.16

Gene sequence:

>1179_bases
ATGATGCTTGACTATAACTCCCTCTTGCTGGCGCTCGGCGTGTCGACAGCATGTCTTGCCGTGACCTTGATGGGCGGCTG
GCTCGTCCGCCGGGCCGAAACCGTGCTGCTCACCGCCACCGTCGGCCTGGTCTTCGTCGTCAGCGGCATTTTTGTCTACA
GCGGCTATGTGGACAGGCCGGAGATAGGGTTCGGCATTGCCAATTTCGTGCTGTTCCATGCCGGTTTCGCCACCATCTGG
GGTGCCGGCCGACAGTTTCTCACCGGCCGCCTGCCCTTGCCGGGCATTGCGATCCGCGCGCTGGCGGCGATGACCTTCTC
CATCGTGCCGCTGTTATCGGGTTATGACGGCCTGGCCTTCATATCGGACAATCTTGCCATCGCCCTGCTGCTCTTTGCCA
CCGCCCGGCAATATTGGCTTGCCCGCGCCGAGGCGCCGGCGCCGATCCTCGGCATCACGGCGCTCTATACGCTGACGGGG
ATTTCTTTCGTGCTTTGCGCCGCCGTGCTGATCTCCGACGGCAAACTGGTGCTCGGCAAGGCGCCGAGCAACTGGGCCGA
AGATCTGAGCCTTGCCGTCTGCATCGCCGGCATGACCGGGATCGGCGCCCTGTCGCTGGCGCTGCATCAGTGGCGGCTTG
CCGCCCGCCATCGGCTCGAGGCGATCACCGATCCGCTGACCGGGCTGCTCAACCGCCGCGCCCTGTTCGATCAATACGGC
ACGCGGCCGATGGGCTCGACCACCGCCGTCATCGTCTTCGATATCGACCACTTCAAATCGGTCAACGACCGCTTCGGCCA
TGCGAGCGGCGACCGGGTGATCAAGGCCTTCGCCGCCGAGCTCGCCACCCATTGCCGCGCCGGTGATATCGCCGCACGGT
TGGGCGGTGAGGAGTTCGCGCTGGTGCTGAAGGAAACCATGCCCGGTCGGGCGGAACTGGCGGCCGAGCGCATCCGCAGG
GCTTTCGAGGCGCGCGAGATCGAGATCGATGACGAGGTGCTGACATGCACCGTCAGCGTCGGCGTTGCGCCCGGCCGCGC
CAAGAGCCTGGATTTCGACGCCATGCTGAGTGCCGCCGACAAGGCGCTCTACGCCGCCAAGCGGGGCGGGCGCAACCGGG
TCGAGCTTGCCGGCCACCTCGAGGCGGTTCCGGTCGAGGCGTCGCGCACGGCGTCTTGA

Upstream 100 bases:

>100_bases
TGTGCAATGCATCATTTGTTAACGGATGCATAAGACATTTCTCACGCGGACACAGGCTGCCGATCATCCGGCGGGAAAAC
ACCTGCGGAGACTGAAAAGC

Downstream 100 bases:

>100_bases
TTCCTGACGGCAGCCCTCATAATATCGCCCCTGGCCGGATGCGGCCAGCCGCCCCGCGACGCTTCGGCGTTATGGTGAAT
GCATCCAAACCATCCTTCAC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MMLDYNSLLLALGVSTACLAVTLMGGWLVRRAETVLLTATVGLVFVVSGIFVYSGYVDRPEIGFGIANFVLFHAGFATIW
GAGRQFLTGRLPLPGIAIRALAAMTFSIVPLLSGYDGLAFISDNLAIALLLFATARQYWLARAEAPAPILGITALYTLTG
ISFVLCAAVLISDGKLVLGKAPSNWAEDLSLAVCIAGMTGIGALSLALHQWRLAARHRLEAITDPLTGLLNRRALFDQYG
TRPMGSTTAVIVFDIDHFKSVNDRFGHASGDRVIKAFAAELATHCRAGDIAARLGGEEFALVLKETMPGRAELAAERIRR
AFEAREIEIDDEVLTCTVSVGVAPGRAKSLDFDAMLSAADKALYAAKRGGRNRVELAGHLEAVPVEASRTAS

Sequences:

>Translated_392_residues
MMLDYNSLLLALGVSTACLAVTLMGGWLVRRAETVLLTATVGLVFVVSGIFVYSGYVDRPEIGFGIANFVLFHAGFATIW
GAGRQFLTGRLPLPGIAIRALAAMTFSIVPLLSGYDGLAFISDNLAIALLLFATARQYWLARAEAPAPILGITALYTLTG
ISFVLCAAVLISDGKLVLGKAPSNWAEDLSLAVCIAGMTGIGALSLALHQWRLAARHRLEAITDPLTGLLNRRALFDQYG
TRPMGSTTAVIVFDIDHFKSVNDRFGHASGDRVIKAFAAELATHCRAGDIAARLGGEEFALVLKETMPGRAELAAERIRR
AFEAREIEIDDEVLTCTVSVGVAPGRAKSLDFDAMLSAADKALYAAKRGGRNRVELAGHLEAVPVEASRTAS
>Mature_392_residues
MMLDYNSLLLALGVSTACLAVTLMGGWLVRRAETVLLTATVGLVFVVSGIFVYSGYVDRPEIGFGIANFVLFHAGFATIW
GAGRQFLTGRLPLPGIAIRALAAMTFSIVPLLSGYDGLAFISDNLAIALLLFATARQYWLARAEAPAPILGITALYTLTG
ISFVLCAAVLISDGKLVLGKAPSNWAEDLSLAVCIAGMTGIGALSLALHQWRLAARHRLEAITDPLTGLLNRRALFDQYG
TRPMGSTTAVIVFDIDHFKSVNDRFGHASGDRVIKAFAAELATHCRAGDIAARLGGEEFALVLKETMPGRAELAAERIRR
AFEAREIEIDDEVLTCTVSVGVAPGRAKSLDFDAMLSAADKALYAAKRGGRNRVELAGHLEAVPVEASRTAS

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1787802, Length=171, Percent_Identity=36.2573099415205, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI87082007, Length=164, Percent_Identity=40.2439024390244, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787262, Length=159, Percent_Identity=37.7358490566038, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1786584, Length=209, Percent_Identity=33.4928229665072, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI145693134, Length=166, Percent_Identity=36.144578313253, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI87081881, Length=172, Percent_Identity=37.2093023255814, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1788085, Length=162, Percent_Identity=31.4814814814815, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87081977, Length=157, Percent_Identity=32.484076433121, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787541, Length=167, Percent_Identity=32.9341317365269, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87081974, Length=183, Percent_Identity=30.6010928961749, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788381, Length=156, Percent_Identity=34.6153846153846, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787816, Length=153, Percent_Identity=34.640522875817, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788956, Length=87, Percent_Identity=45.9770114942529, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 41751; Mature: 41751

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLDYNSLLLALGVSTACLAVTLMGGWLVRRAETVLLTATVGLVFVVSGIFVYSGYVDRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCCCC
EIGFGIANFVLFHAGFATIWGAGRQFLTGRLPLPGIAIRALAAMTFSIVPLLSGYDGLAF
CCCHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
ISDNLAIALLLFATARQYWLARAEAPAPILGITALYTLTGISFVLCAAVLISDGKLVLGK
ECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
APSNWAEDLSLAVCIAGMTGIGALSLALHQWRLAARHRLEAITDPLTGLLNRRALFDQYG
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TRPMGSTTAVIVFDIDHFKSVNDRFGHASGDRVIKAFAAELATHCRAGDIAARLGGEEFA
CCCCCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHH
LVLKETMPGRAELAAERIRRAFEAREIEIDDEVLTCTVSVGVAPGRAKSLDFDAMLSAAD
HHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHH
KALYAAKRGGRNRVELAGHLEAVPVEASRTAS
HHHHHHHCCCCCEEEEECCCEEECCCCCCCCC
>Mature Secondary Structure
MMLDYNSLLLALGVSTACLAVTLMGGWLVRRAETVLLTATVGLVFVVSGIFVYSGYVDRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCCCC
EIGFGIANFVLFHAGFATIWGAGRQFLTGRLPLPGIAIRALAAMTFSIVPLLSGYDGLAF
CCCHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
ISDNLAIALLLFATARQYWLARAEAPAPILGITALYTLTGISFVLCAAVLISDGKLVLGK
ECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
APSNWAEDLSLAVCIAGMTGIGALSLALHQWRLAARHRLEAITDPLTGLLNRRALFDQYG
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TRPMGSTTAVIVFDIDHFKSVNDRFGHASGDRVIKAFAAELATHCRAGDIAARLGGEEFA
CCCCCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHH
LVLKETMPGRAELAAERIRRAFEAREIEIDDEVLTCTVSVGVAPGRAKSLDFDAMLSAAD
HHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHH
KALYAAKRGGRNRVELAGHLEAVPVEASRTAS
HHHHHHHCCCCCEEEEECCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA