| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ybdZ [H]
Identifier: 209400967
GI number: 209400967
Start: 698873
End: 699091
Strand: Direct
Name: ybdZ [H]
Synonym: ECH74115_0670
Alternate gene names: 209400967
Gene position: 698873-699091 (Clockwise)
Preceding gene: 209395931
Following gene: 209400326
Centisome position: 12.54
GC content: 54.79
Gene sequence:
>219_bases ATGGCATTCAGTAATCCCTTCGATGATCCACAGGGAGTGTTTTACATTTTGCGCAATGCGCAGGGGCAATTCAGTCTGTG GCCGCAACAATGCGCCTTACCGGCAGGCTGGGACATTGTGTGTCAGCCGCAGTCACAAGAGTCCTGCCAGCAGTGGCTGG AAGTCCACTGGCGTACTCTGACACCGGCGAATTTCACCCAGTTGCAGGAGGCACAATGA
Upstream 100 bases:
>100_bases GTCAGGTTGACGGCGGACATGATGCGCTTTGTTGGCGCGGTGGCTTGATGCAGGGGTTAATCGACCTCTGGCAACCACTT TTCCATGACAGGAGTTGAAT
Downstream 100 bases:
>100_bases GCCAGCATTTACCTTTGGTCGCCGCACAGCCCGGCATCTGGATGGCAGAAAAACTGTCAGAATTACCCTCCGCCTGGAGC GTGGCGCATTACGTTGAGTT
Product: mbtH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MAFSNPFDDPQGVFYILRNAQGQFSLWPQQCALPAGWDIVCQPQSQESCQQWLEVHWRTLTPANFTQLQEAQ
Sequences:
>Translated_72_residues MAFSNPFDDPQGVFYILRNAQGQFSLWPQQCALPAGWDIVCQPQSQESCQQWLEVHWRTLTPANFTQLQEAQ >Mature_71_residues AFSNPFDDPQGVFYILRNAQGQFSLWPQQCALPAGWDIVCQPQSQESCQQWLEVHWRTLTPANFTQLQEAQ
Specific function: Could be involved in enterobactin synthesis [H]
COG id: COG3251
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis mbtH [H]
Homologues:
Organism=Escherichia coli, GI87081760, Length=72, Percent_Identity=93.0555555555556, Blast_Score=140, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015166 - InterPro: IPR005153 [H]
Pfam domain/function: PF03621 MbtH [H]
EC number: NA
Molecular weight: Translated: 8327; Mature: 8196
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSNPFDDPQGVFYILRNAQGQFSLWPQQCALPAGWDIVCQPQSQESCQQWLEVHWRTL CCCCCCCCCCCCEEEEEECCCCCCEECHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCC TPANFTQLQEAQ CCCCCCCCCCCC >Mature Secondary Structure AFSNPFDDPQGVFYILRNAQGQFSLWPQQCALPAGWDIVCQPQSQESCQQWLEVHWRTL CCCCCCCCCCCEEEEEECCCCCCEECHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCC TPANFTQLQEAQ CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2974033; 1826089; 9278503 [H]