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The map label for this gene is yjiC [H]

Identifier: 209400960

GI number: 209400960

Start: 5483960

End: 5484790

Strand: Reverse

Name: yjiC [H]

Synonym: ECH74115_5831

Alternate gene names: 209400960

Gene position: 5484790-5483960 (Counterclockwise)

Preceding gene: 209400383

Following gene: 209400656

Centisome position: 98.43

GC content: 39.71

Gene sequence:

>831_bases
ATGTCTATGCCATTAAGCAATGTCCTTCAGAGTCAAATTATTACAGATAATCACTTCCTTCATCATCCAAAAGTCGAAAG
TGAGTTAACACGTAAATATGAACGTGCACGCCTGGATACGGAAAATATCTATCTTCTGCCTCTTGCTCGTGGCAATAACC
ATAATTACGATGGAAAAAGCGTTGTCGAAATTAGAAAACTTGATATTAGTAAAGAATCCTGGCCATTTAATTATGTGACA
GAAGCATGCAGAGAATCCGATGGTATTACAACAACAGGACGTATGCTCTATCGAAACTTGAAAATCACCTCAGCTTTAGA
CGAAATATATGGTGGTATATGTAAAAAGGCGCATGCTGCTACAGAGTTAGCAGAAGGTTTACGGCTAAATTTATTTATGA
AGAGCCCTTTCGATCCTGTTGAGGACTATACAGTTCATGAAATAACATTAGGCCCTGGTTGCAATGTTCCAGGTTACGCC
GGAACCACGATAGGATATATTTCAACCCTTCCAGCTTCTCAGGCAAAAAGATGGACCAATGAGCAGCCAAGAATTGATAT
CTATATTGATCAGATAATAACTGTCTCAGGGGTAGCAAATTCTTCCGGATTCGCCCTTGCCGCATTACTTAATGCTAATA
TTGAGTTGGGTAATGACCCAATAATTGGTATAGAAGCCTATCCAGGTACCGCGGAGATCCATGCAAAAATGGGATATAAA
GTTATCCCCGGTGATGAAGATGCGCCACTCAAACGCATGACTCTGCAACCGTCATCTCTTCCAGAACTGTTTGAATTAAA
AAATGGTGAATGGAATTATATTGGCAAATAA

Upstream 100 bases:

>100_bases
AACAGAAACATGCATGTCATTTGTTTACTTCTCTTTTTACTACAGAAAAATTTATCTATTTTTCTAAACATCAGTGAAAT
ACTCATAAAAGGTAACTATT

Downstream 100 bases:

>100_bases
CCACTGAGAAGAATGAGTACTAACATTCAGGTTATATAGATATTTAAACAATACCCTGCAATTTACAAAGTAATACTCAT
TGCGACTTCTTAATTTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSMPLSNVLQSQIITDNHFLHHPKVESELTRKYERARLDTENIYLLPLARGNNHNYDGKSVVEIRKLDISKESWPFNYVT
EACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYA
GTTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYK
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK

Sequences:

>Translated_276_residues
MSMPLSNVLQSQIITDNHFLHHPKVESELTRKYERARLDTENIYLLPLARGNNHNYDGKSVVEIRKLDISKESWPFNYVT
EACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYA
GTTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYK
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
>Mature_275_residues
SMPLSNVLQSQIITDNHFLHHPKVESELTRKYERARLDTENIYLLPLARGNNHNYDGKSVVEIRKLDISKESWPFNYVTE
ACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAG
TTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYKV
IPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjfZ [H]

Homologues:

Organism=Escherichia coli, GI1790781, Length=276, Percent_Identity=93.4782608695652, Blast_Score=537, Evalue=1e-154,
Organism=Escherichia coli, GI1790648, Length=226, Percent_Identity=41.5929203539823, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021220 [H]

Pfam domain/function: PF10887 DUF2686 [H]

EC number: NA

Molecular weight: Translated: 30686; Mature: 30555

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPLSNVLQSQIITDNHFLHHPKVESELTRKYERARLDTENIYLLPLARGNNHNYDGKS
CCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCE
VVEIRKLDISKESWPFNYVTEACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAA
EEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTN
HHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHCCC
EQPRIDIYIDQIITVSGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYK
CCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCEEECCCCEEEEEECCCCEEEEEECCCE
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
ECCCCCCCCCEEEEECCCCCCHHHHCCCCCEECCCC
>Mature Secondary Structure 
SMPLSNVLQSQIITDNHFLHHPKVESELTRKYERARLDTENIYLLPLARGNNHNYDGKS
CCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCE
VVEIRKLDISKESWPFNYVTEACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAA
EEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTN
HHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHCCC
EQPRIDIYIDQIITVSGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYK
CCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCEEECCCCEEEEEECCCCEEEEEECCCE
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
ECCCCCCCCCEEEEECCCCCCHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]