Click here to switch to the map view.

The map label for this gene is arpB [H]

Identifier: 209400950

GI number: 209400950

Start: 4777860

End: 4779848

Strand: Reverse

Name: arpB [H]

Synonym: ECH74115_5138

Alternate gene names: 209400950

Gene position: 4779848-4777860 (Counterclockwise)

Preceding gene: 209399820

Following gene: 209397751

Centisome position: 85.78

GC content: 36.35

Gene sequence:

>1989_bases
ATGGTTGATAACGTAACTGTTAGCAGAGTATGTATACAATCTCCTTCTTTCGTGCCTGATTTGGATGGAGAAAAAAATAA
ATCTCAATTATTCGTTGACGATATAGTTGCGTATCTTAAAAGTCCTTCAGTTTATTCACTTGAAAAAGAGGGGCCGTTAA
ATCATTTTGTTAATCATTGTTCTGAAGTTGAGTTAGGTTTCTATAGCGATGGTGCATATTCAATTCTTGTCTCCAGATCT
AAGCAACAACCTGAAGGTATGATTTTAACCGTAAGCGATGCAGACGCAATCAATATAGTACATATTTCCGTATCTCCAGT
GCTTATAAAATTCCTGGATGATATTTTTACTTGCCTTCATACGTACCCTGATGATGAGAGTTTTACAAAAGAGCAGATAA
AAGCTAATAGCAAATATGATATTGTAGATTATAATTGCCTGTTGCATTTTACTGGAAAACCAAAAAGTTTAATAGAATGT
AGACATTTTGCTCTGCAATACTGTATAGATTCAATGAATGAGCATACAGGGAAAGTTCCATTAAAGGCTTACTATTCATC
TCCGGAAGATATACAAAAACATATTCCTTTCGAGCTTGAGCAGCAATTTAACAATCTACAAAAAAATCCACCACCCGGTA
CATGCGTCGTTGCCAGTGATAAGTTTGGGGAGGCATTATCTGTCTTTTTTCACAGAATGGAAAAAGAGAAGTTAACGCAT
ATGACGGCAATCGTTCAATCTCAAACACACGCTATGGCCGTCCGCTTGAGGATCAAAAAAACGCCTGCTGGTGAAACAGA
ATATGTTGTATCCTTTTATGATCCTAATGCAACCAATACTGCAGTACGCTATAAAGCAAACAACTGTGATTCTTTTGGGT
CATTGCAATCGTTTATAAATATTCAACAGGCAAAACAAAAATGGGTAATAACAGATATTTGCTCCGAGTGTGTAGGAATA
ACCCCTTATCTCCCTCGGGAACAAGCCCATTTATTAAGTGGTATTGAAAATGAGTTGCAACCTCCATTATCACCACCAGC
ATTATTTCTATTAATGAGAATGGGGATATATAAAAACATTGTTCTTTTTTTCGATAAATTAAAAAACTCTCAAGAAATGA
CAGCATCAAAGGCTCTTGATATTCTTGCTGCGAAATCACCTGAAGGAATATATGGGTTATGTGTATTATTGTATCACAAT
ACTATTGATAAGTTTAATGATTACATAACAAATTTAAAAGAGTTGACCAGAAAATATAATTTTAGCCAAGAGGACCTGGA
AACTCTACTCCTTGCGAAAGATAATCTCGGAGTGAGCTGGATTCCCAGGGCTTTGAAAAATAATCAAAATAAAATTGTCA
AAGCATGGTTGTTGGCGATAGATGACTTTGAGAAAGAATTTGGGGTAAATAAAAATGAAATACTTCTTCGTATAGGAAAG
GAAATAGACTCAATTGATGATTTAAATAGCGCTATTAGAACCAATGATTATAATGTTGTTAATATATTGCTAGCCAATAT
AAAAGCCAAAATGTTTAAAAATGAATTAAATAAAGAAGATATATTGAAACTGATGGCAGCAAGAGAAAAAGTGGCGGGAG
CATCAGACAAATGGACGAAGGCATCAGGCTTATATTCTGCGATAGTGAAAGGGCATACGAAGATTGTTGCTGCCTGGATG
GAGACAGCTGAAGTGATAGCCAGCCATTATGAAAATGATAAAGATGTAGTGAGAGAACTCCTGTCGCTGAGCAGAAATAA
TGCAGTTTGCTCTTTGTATGTTGCCAGCTATAAGACAATGAGTAAGCAGGTCATTGATGTATATCTGAATGCGGCGATTC
GCCTGGCGTTGCAACACGGGTTCACTTTCGATGAGATTTTGGAGCAGTTTACCCGTGACTTTGATGGGAAGTCATTCTCT
CTTGCGGTAGAGAAAGCGGATGATATATATGGGTCTCTGGCTGAAAATATTCAAAATTGTGGTTGGTGA

Upstream 100 bases:

>100_bases
AAAAGACAAATAACTCTATAAATGAGCGAAATTTGATAGTTGATTTTTAAATAGTAACCTTATTATTACTACAACTTTCA
TATGGATGAGGGGAAAGAAA

Downstream 100 bases:

>100_bases
AAATGAAAATTATCTTAAAGATGTGATGATGCAACTGGAAGCGAAGAATAATGAAGGCAAATATGTAATAAGCAAGGCAA
ATGGCAATCCTGTATTTAAA

Product: ShET2 enterotoxin, N- region family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MVDNVTVSRVCIQSPSFVPDLDGEKNKSQLFVDDIVAYLKSPSVYSLEKEGPLNHFVNHCSEVELGFYSDGAYSILVSRS
KQQPEGMILTVSDADAINIVHISVSPVLIKFLDDIFTCLHTYPDDESFTKEQIKANSKYDIVDYNCLLHFTGKPKSLIEC
RHFALQYCIDSMNEHTGKVPLKAYYSSPEDIQKHIPFELEQQFNNLQKNPPPGTCVVASDKFGEALSVFFHRMEKEKLTH
MTAIVQSQTHAMAVRLRIKKTPAGETEYVVSFYDPNATNTAVRYKANNCDSFGSLQSFINIQQAKQKWVITDICSECVGI
TPYLPREQAHLLSGIENELQPPLSPPALFLLMRMGIYKNIVLFFDKLKNSQEMTASKALDILAAKSPEGIYGLCVLLYHN
TIDKFNDYITNLKELTRKYNFSQEDLETLLLAKDNLGVSWIPRALKNNQNKIVKAWLLAIDDFEKEFGVNKNEILLRIGK
EIDSIDDLNSAIRTNDYNVVNILLANIKAKMFKNELNKEDILKLMAAREKVAGASDKWTKASGLYSAIVKGHTKIVAAWM
ETAEVIASHYENDKDVVRELLSLSRNNAVCSLYVASYKTMSKQVIDVYLNAAIRLALQHGFTFDEILEQFTRDFDGKSFS
LAVEKADDIYGSLAENIQNCGW

Sequences:

>Translated_662_residues
MVDNVTVSRVCIQSPSFVPDLDGEKNKSQLFVDDIVAYLKSPSVYSLEKEGPLNHFVNHCSEVELGFYSDGAYSILVSRS
KQQPEGMILTVSDADAINIVHISVSPVLIKFLDDIFTCLHTYPDDESFTKEQIKANSKYDIVDYNCLLHFTGKPKSLIEC
RHFALQYCIDSMNEHTGKVPLKAYYSSPEDIQKHIPFELEQQFNNLQKNPPPGTCVVASDKFGEALSVFFHRMEKEKLTH
MTAIVQSQTHAMAVRLRIKKTPAGETEYVVSFYDPNATNTAVRYKANNCDSFGSLQSFINIQQAKQKWVITDICSECVGI
TPYLPREQAHLLSGIENELQPPLSPPALFLLMRMGIYKNIVLFFDKLKNSQEMTASKALDILAAKSPEGIYGLCVLLYHN
TIDKFNDYITNLKELTRKYNFSQEDLETLLLAKDNLGVSWIPRALKNNQNKIVKAWLLAIDDFEKEFGVNKNEILLRIGK
EIDSIDDLNSAIRTNDYNVVNILLANIKAKMFKNELNKEDILKLMAAREKVAGASDKWTKASGLYSAIVKGHTKIVAAWM
ETAEVIASHYENDKDVVRELLSLSRNNAVCSLYVASYKTMSKQVIDVYLNAAIRLALQHGFTFDEILEQFTRDFDGKSFS
LAVEKADDIYGSLAENIQNCGW
>Mature_662_residues
MVDNVTVSRVCIQSPSFVPDLDGEKNKSQLFVDDIVAYLKSPSVYSLEKEGPLNHFVNHCSEVELGFYSDGAYSILVSRS
KQQPEGMILTVSDADAINIVHISVSPVLIKFLDDIFTCLHTYPDDESFTKEQIKANSKYDIVDYNCLLHFTGKPKSLIEC
RHFALQYCIDSMNEHTGKVPLKAYYSSPEDIQKHIPFELEQQFNNLQKNPPPGTCVVASDKFGEALSVFFHRMEKEKLTH
MTAIVQSQTHAMAVRLRIKKTPAGETEYVVSFYDPNATNTAVRYKANNCDSFGSLQSFINIQQAKQKWVITDICSECVGI
TPYLPREQAHLLSGIENELQPPLSPPALFLLMRMGIYKNIVLFFDKLKNSQEMTASKALDILAAKSPEGIYGLCVLLYHN
TIDKFNDYITNLKELTRKYNFSQEDLETLLLAKDNLGVSWIPRALKNNQNKIVKAWLLAIDDFEKEFGVNKNEILLRIGK
EIDSIDDLNSAIRTNDYNVVNILLANIKAKMFKNELNKEDILKLMAAREKVAGASDKWTKASGLYSAIVKGHTKIVAAWM
ETAEVIASHYENDKDVVRELLSLSRNNAVCSLYVASYKTMSKQVIDVYLNAAIRLALQHGFTFDEILEQFTRDFDGKSFS
LAVEKADDIYGSLAENIQNCGW

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=579, Percent_Identity=26.4248704663212, Blast_Score=181, Evalue=9e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 74764; Mature: 74764

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDNVTVSRVCIQSPSFVPDLDGEKNKSQLFVDDIVAYLKSPSVYSLEKEGPLNHFVNHC
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEECCCCCHHHHHHHH
SEVELGFYSDGAYSILVSRSKQQPEGMILTVSDADAINIVHISVSPVLIKFLDDIFTCLH
CCCCEEEECCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHH
TYPDDESFTKEQIKANSKYDIVDYNCLLHFTGKPKSLIECRHFALQYCIDSMNEHTGKVP
CCCCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LKAYYSSPEDIQKHIPFELEQQFNNLQKNPPPGTCVVASDKFGEALSVFFHRMEKEKLTH
HHEECCCHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
MTAIVQSQTHAMAVRLRIKKTPAGETEYVVSFYDPNATNTAVRYKANNCDSFGSLQSFIN
HHHHHHHHHHEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHH
IQQAKQKWVITDICSECVGITPYLPREQAHLLSGIENELQPPLSPPALFLLMRMGIYKNI
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VLFFDKLKNSQEMTASKALDILAAKSPEGIYGLCVLLYHNTIDKFNDYITNLKELTRKYN
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSQEDLETLLLAKDNLGVSWIPRALKNNQNKIVKAWLLAIDDFEKEFGVNKNEILLRIGK
CCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEECH
EIDSIDDLNSAIRTNDYNVVNILLANIKAKMFKNELNKEDILKLMAAREKVAGASDKWTK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCH
ASGLYSAIVKGHTKIVAAWMETAEVIASHYENDKDVVRELLSLSRNNAVCSLYVASYKTM
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHH
SKQVIDVYLNAAIRLALQHGFTFDEILEQFTRDFDGKSFSLAVEKADDIYGSLAENIQNC
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHC
GW
CC
>Mature Secondary Structure
MVDNVTVSRVCIQSPSFVPDLDGEKNKSQLFVDDIVAYLKSPSVYSLEKEGPLNHFVNHC
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEECCCCCHHHHHHHH
SEVELGFYSDGAYSILVSRSKQQPEGMILTVSDADAINIVHISVSPVLIKFLDDIFTCLH
CCCCEEEECCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHH
TYPDDESFTKEQIKANSKYDIVDYNCLLHFTGKPKSLIECRHFALQYCIDSMNEHTGKVP
CCCCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LKAYYSSPEDIQKHIPFELEQQFNNLQKNPPPGTCVVASDKFGEALSVFFHRMEKEKLTH
HHEECCCHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
MTAIVQSQTHAMAVRLRIKKTPAGETEYVVSFYDPNATNTAVRYKANNCDSFGSLQSFIN
HHHHHHHHHHEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHH
IQQAKQKWVITDICSECVGITPYLPREQAHLLSGIENELQPPLSPPALFLLMRMGIYKNI
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VLFFDKLKNSQEMTASKALDILAAKSPEGIYGLCVLLYHNTIDKFNDYITNLKELTRKYN
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSQEDLETLLLAKDNLGVSWIPRALKNNQNKIVKAWLLAIDDFEKEFGVNKNEILLRIGK
CCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEECH
EIDSIDDLNSAIRTNDYNVVNILLANIKAKMFKNELNKEDILKLMAAREKVAGASDKWTK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCH
ASGLYSAIVKGHTKIVAAWMETAEVIASHYENDKDVVRELLSLSRNNAVCSLYVASYKTM
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHH
SKQVIDVYLNAAIRLALQHGFTFDEILEQFTRDFDGKSFSLAVEKADDIYGSLAENIQNC
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHC
GW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]