| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is hisA [H]
Identifier: 209400912
GI number: 209400912
Start: 2732025
End: 2732762
Strand: Direct
Name: hisA [H]
Synonym: ECH74115_2957
Alternate gene names: 209400912
Gene position: 2732025-2732762 (Clockwise)
Preceding gene: 209396111
Following gene: 209397885
Centisome position: 49.03
GC content: 55.96
Gene sequence:
>738_bases ATGATTATTCCGGCATTAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAACGCGATTA CGGTAACGACCCGCTGCCGCGCTTACAGGATTACGCCGCACAAGGTGCCGAAGTGCTGCATTTGGTGGATCTGACCGGGG CAAAAGATCCGGCAAAACGTCAAATCCCGCTGATTAAAACCCTGGTCGCTGGCGTTAACGTTCCGGTGCAGGTTGGCGGC GGCGTGCGTAGCGAAGAAGACGTGGCGGCGTTACTGGAAGCTGGGGTTGCGCGCGTGGTGGTTGGCTCCACTGCGGTGAA ATCACCAGAAATGGTGAAAGGCTGGTTTGAACGTTTCGGTGCCGATGCCTTAGTGCTGGCGCTGGATGTCCGTATTGACG AGCAAGGCAACAAGCAGGTGGCGGTCAGCGGCTGGCAAGAGAATTCGGGCGTGTCACTGGAACAACTGGTGGAAACCTAT CTGCCCGTCGGCCTGAAACATGTGCTGTGTACCGATATCTCGCGCGACGGCACGCTGGCAGGCTCTAACGTCTCTTTATA TGAAGAAGTGTGCGCCAGATATCCGCAGGTGGCATTTCAGTCATCCGGCGGCATTGGCGACATTAACGATGTTGCTGCCC TGCGTGGCACTGGCGTGCGCGGCGTAATAGTTGGTCGTGCATTACTGGAAGGTAAATTCACCGTGAAGGAGGCCATCTCA TGCTGGCAAAACGCATAA
Upstream 100 bases:
>100_bases CCGCGGCGGTACAAAAAGATAACTTCTACGGCGTGCAGTTCCATCCGGAGCGTTCTGGTGCCGCTGGCGCTAAGTTGCTG AAAAACTTCCTGGAGATGTG
Downstream 100 bases:
>100_bases TTCCATGTCTCGACGTTCGTGATGGTCAGGTGGTAAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTG CCGCTGGCAAAACGCTACGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGG GVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTGVRGVIVGRALLEGKFTVKEAIS CWQNA
Sequences:
>Translated_245_residues MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGG GVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTGVRGVIVGRALLEGKFTVKEAIS CWQNA >Mature_245_residues MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGG GVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTGVRGVIVGRALLEGKFTVKEAIS CWQNA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=245, Percent_Identity=98.3673469387755, Blast_Score=483, Evalue=1e-138, Organism=Escherichia coli, GI1788336, Length=231, Percent_Identity=26.4069264069264, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26031; Mature: 26031
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKR CCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHH QIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFG CCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHEEECCHHCCCHHHHHHHHHHHC ADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLA CCEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCC GSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTGVRGVIVGRALLEGKFTVKEAIS CCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH CWQNA HHCCC >Mature Secondary Structure MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKR CCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHH QIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFG CCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHEEECCHHCCCHHHHHHHHHHHC ADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLA CCEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCC GSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTGVRGVIVGRALLEGKFTVKEAIS CCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH CWQNA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA