| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209400813
Identifier: 209400813
GI number: 209400813
Start: 4443168
End: 4443590
Strand: Direct
Name: 209400813
Synonym: ECH74115_4807
Alternate gene names: NA
Gene position: 4443168-4443590 (Clockwise)
Preceding gene: 209398505
Following gene: 209400084
Centisome position: 79.74
GC content: 54.14
Gene sequence:
>423_bases GTGCTGAACGATCCCCGATTTACCGCAGAAGTCGAGCTGACCATTCCCTTTCACGACGTCGATATGATGGGCGTGGCCTG GCACGGTAACTATTTTCGCTACTTTGAAGTGGCTCGCGAGGCGCTGCTCAACCAGTTCAATTACGGCTATCGGCAAATGA AAGAGTCCGGTTATTTGTGGCCAGTGGTCGATGCGCGGGTGAAATATCGCCACGCCCTCACCTTTGAGCAACGCATCCGC GTGCGTGCGCATATCGAAGAGTTCGAAAACCGTCTGCGGATTGGCTATCAGATTTTCGATGCCGAAACGGGCAAACGCGC CACCACCGGATACACCATTCAGGTCGCGGTCGACGAGCAAAGTCGCGAACTGTGCTTTGTCAGCCCCGATATTCTGTTTG AACGCATGGGAGTCAAACCATGA
Upstream 100 bases:
>100_bases CGCCGCGCGTCTGGAACATTACGCGCTCCAGTCGCCTCTCGACTGGTTTAATTTTTTCGATTTCTGGCAACTGCCGGAAA TTCAGGACAAGGAGTAAAGG
Downstream 100 bases:
>100_bases AATTTTTACCGCTGCTGGCGCTGCTGATTAGCCCGTTTGTGAGCGCCCTGACCCTGGACGATCTTCAGCAACGCTTTACC GAACAACCGGTGATCCGCGC
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase Domain Protein; Thioesterase Family Protein; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein; Thioesterase Superfamily; 4-Hydroxybenzoyl-CoA Thioesterase Family Protein; Conserved Thioesterase; Esterase; Acyl-CoA Thioesterase; FcbC Thioesterase; GTP Cyclohydrolase I; Thioesterase Protein; Thioesterase Domain-Containing Protein; Protein With Thioesterase Domain-Containing Protein; Thioesterase YneP
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MLNDPRFTAEVELTIPFHDVDMMGVAWHGNYFRYFEVAREALLNQFNYGYRQMKESGYLWPVVDARVKYRHALTFEQRIR VRAHIEEFENRLRIGYQIFDAETGKRATTGYTIQVAVDEQSRELCFVSPDILFERMGVKP
Sequences:
>Translated_140_residues MLNDPRFTAEVELTIPFHDVDMMGVAWHGNYFRYFEVAREALLNQFNYGYRQMKESGYLWPVVDARVKYRHALTFEQRIR VRAHIEEFENRLRIGYQIFDAETGKRATTGYTIQVAVDEQSRELCFVSPDILFERMGVKP >Mature_140_residues MLNDPRFTAEVELTIPFHDVDMMGVAWHGNYFRYFEVAREALLNQFNYGYRQMKESGYLWPVVDARVKYRHALTFEQRIR VRAHIEEFENRLRIGYQIFDAETGKRATTGYTIQVAVDEQSRELCFVSPDILFERMGVKP
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16620; Mature: 16620
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNDPRFTAEVELTIPFHDVDMMGVAWHGNYFRYFEVAREALLNQFNYGYRQMKESGYLW CCCCCCEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEE PVVDARVKYRHALTFEQRIRVRAHIEEFENRLRIGYQIFDAETGKRATTGYTIQVAVDEQ EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEECCCEEEEEEECCC SRELCFVSPDILFERMGVKP CCCEEEECHHHHHHHCCCCC >Mature Secondary Structure MLNDPRFTAEVELTIPFHDVDMMGVAWHGNYFRYFEVAREALLNQFNYGYRQMKESGYLW CCCCCCEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEE PVVDARVKYRHALTFEQRIRVRAHIEEFENRLRIGYQIFDAETGKRATTGYTIQVAVDEQ EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEECCCEEEEEEECCC SRELCFVSPDILFERMGVKP CCCEEEECHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA