| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is frmR
Identifier: 209400747
GI number: 209400747
Start: 441303
End: 441422
Strand: Reverse
Name: frmR
Synonym: ECH74115_0432
Alternate gene names: 209400747
Gene position: 441422-441303 (Counterclockwise)
Preceding gene: 209398918
Following gene: 209400668
Centisome position: 7.92
GC content: 47.5
Gene sequence:
>120_bases ATGGCAGAAGTGCTTGAAAGCCATATCCGGGAAACGTTTGACCGAAATGACTGCTACAGCCGCGAAGTCAGCCAATCCGT TGACGACACTATTGAACTGGTTCGTGCCTATCTTAAATAG
Upstream 100 bases:
>100_bases AGGGCAGATTGATGCTCTGGAACGGTCGCTGGAGGGTGATGCCGAATGCCGTGCCATACTCCAACAGATCGCTGCCGTTC GGGGCGCGGCTAATGGGCTG
Downstream 100 bases:
>100_bases CTGAATCTATTACCATATTGAGGAAGAGCGAGAGATGAAATCACGTGCTGCCGTTGCATTTGCTCCCGGTAAACCGCTGG AAATCGTTGAAATTGACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK
Sequences:
>Translated_39_residues MAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK >Mature_38_residues AEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK
Specific function: Repressor of the frmRAB operon
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family
Homologues:
Organism=Escherichia coli, GI87081725, Length=39, Percent_Identity=100, Blast_Score=82, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FRMR_ECO24 (A7ZIA5)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001461534.1 - ProteinModelPortal: A7ZIA5 - SMR: A7ZIA5 - STRING: A7ZIA5 - EnsemblBacteria: EBESCT00000020012 - GeneID: 5587587 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_0382 - eggNOG: COG1937 - GeneTree: EBGT00050000008906 - HOGENOM: HBG661347 - OMA: RMAEVGH - ProtClustDB: PRK11352 - BioCyc: ECOL331111:ECE24377A_0382-MONOMER - GO: GO:0005737 - GO: GO:0006350 - InterPro: IPR003735
Pfam domain/function: PF02583 DUF156
EC number: NA
Molecular weight: Translated: 4619; Mature: 4488
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure AEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA