| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209400671
Identifier: 209400671
GI number: 209400671
Start: 4900074
End: 4900496
Strand: Reverse
Name: 209400671
Synonym: ECH74115_5257
Alternate gene names: NA
Gene position: 4900496-4900074 (Counterclockwise)
Preceding gene: 209395816
Following gene: 209396407
Centisome position: 87.95
GC content: 34.28
Gene sequence:
>423_bases TTGCGTCCTGTACAGATTTTGTATACATACTCTGATGCTGGCAATTCAGTCTTTCTGGTCGTTGATCATCTGCCATGGAC TGACAGCGATAAAATAAATTGGTATCTGAAGCATCAGAATGAAATTAAAAATCAACATCCCCTACCAGAAGGTAGTTGGC ATACCTGGTATGTCATTGATATCGGTAATGGCTTCACTGACTATAAAAAATATATCGAAGGGCCGTATGAAGATCTCTAC TGTTTCCCGACAATTAAGAGCAATGATAATTGCATCACGAAAAATTACTTAATGGTTATTAATGAATACCCTTATCGTAA CACTCATATTGGTATTAACGATTTTACTGAGTATCAATTAACACAAGAAAATAAAATAGAGCAAGTTTTCAATCCGCATA ACTTTAAAAAAGACAATTTTTAG
Upstream 100 bases:
>100_bases TTAACACTATCGAAAGAATCGAAAATTATCTATGAAAAGCAAACTCCAAAAAATTATATTATGTTTATTTCTTCTATGCT GCATCTATAATTTATGGACA
Downstream 100 bases:
>100_bases AAATAAGCCGGATAAAAAAATAGCTTTATCCGGCACTCATATTACAACCAGTTCTTCCGCTTAAAGTACAGATACGGTGC CAGGCCCGCGAGGATCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLKHQNEIKNQHPLPEGSWHTWYVIDIGNGFTDYKKYIEGPYEDLY CFPTIKSNDNCITKNYLMVINEYPYRNTHIGINDFTEYQLTQENKIEQVFNPHNFKKDNF
Sequences:
>Translated_140_residues MRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLKHQNEIKNQHPLPEGSWHTWYVIDIGNGFTDYKKYIEGPYEDLY CFPTIKSNDNCITKNYLMVINEYPYRNTHIGINDFTEYQLTQENKIEQVFNPHNFKKDNF >Mature_140_residues MRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLKHQNEIKNQHPLPEGSWHTWYVIDIGNGFTDYKKYIEGPYEDLY CFPTIKSNDNCITKNYLMVINEYPYRNTHIGINDFTEYQLTQENKIEQVFNPHNFKKDNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16794; Mature: 16794
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLKHQNEIKNQHPLPEGSWHTWYVID CCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEE IGNGFTDYKKYIEGPYEDLYCFPTIKSNDNCITKNYLMVINEYPYRNTHIGINDFTEYQL CCCCCHHHHHHHCCCCCCEEEEEEECCCCCEEECEEEEEEECCCCCCEEECCCCCCEEEE TQENKIEQVFNPHNFKKDNF CCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLKHQNEIKNQHPLPEGSWHTWYVID CCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEE IGNGFTDYKKYIEGPYEDLYCFPTIKSNDNCITKNYLMVINEYPYRNTHIGINDFTEYQL CCCCCHHHHHHHCCCCCCEEEEEEECCCCCEEECEEEEEEECCCCCCEEECCCCCCEEEE TQENKIEQVFNPHNFKKDNF CCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA