| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209400644
Identifier: 209400644
GI number: 209400644
Start: 1347186
End: 1348043
Strand: Reverse
Name: 209400644
Synonym: ECH74115_1340
Alternate gene names: NA
Gene position: 1348043-1347186 (Counterclockwise)
Preceding gene: 209399127
Following gene: 209396197
Centisome position: 24.19
GC content: 54.2
Gene sequence:
>858_bases ATGGATATCTCGCTTCTCAGTACCACCAGTGACCCTGAACAGCTTCGCGCTCTGGCAATTGCCATGGTGCAAAAAGTCAT GGCTGAGAATGCAGAACTTCAGAACCGTATCCGCATCCTGGAAGAGCAGATGAAGCTCGCACGCCAGCAGCGTTTCGGTA AAAAATGCGAATCGCTGGCCGGGATGCAGCGTTCCCTGTTCGAAGAGGATGTTGACGCGGATATCGCAGAAATCTCGGCG CATCTGGACAAACTGCTTCCTCAGACCGGGGACGAAGAAAAAACAACAACACGTCCTGTTCGTAAGCCCTTGCCTTCACC TCTTCCCCGTGCTGAAAAGGTTATCCCGCCAGCTGAGGAACGTTGTCCTGACTGTGATGCCCCCCTGCACTTCATTCGCG ATGAAGTCAGCGAGAAGCTGGAATATATTCCGGCACAGGTCGTGGTCAACCGCTATATCCGCCCGCAGTACAGCTGTCCC TGCTGTGAGAAAGTGTTCAGCGGAAAAATGCCGGCACATATCCTTCCGAAAAGTGCTGTTGAGCCATCGGTCATCGCACA GGTTGTCATCAGCAAATATACCGACCATCTGCCCCTGTATCGCCAGCAGCACATTTTCTCCCGAATGGGGGTGGAGCTCC CCGTCAGTACAATGGCGGATATGGTCGGTGTTGCTGGCGCTGCACTGGCCCCGCTGGCAAAATTGTTACGCCACGAGCTT CTGACACGGGATGTTATTCATGCAGATGAAACGTCCCTGAGGCTCCTTGATACCCGGAAAGGCGGTAAATCCTGCTCCGG CTGGCTGTGGGCTTACGTCAGCGGAGAAAGAGTAAGCGTCAACGGAGCACCGTATTGA
Upstream 100 bases:
>100_bases AAAATGGGTATACCAGTAAGAACCCGAAGATGCTCAGAGCAACGCAATAACTCAATGAAATATAATGAATATCCATGCGT GATGTCATATAATCCACCGC
Downstream 100 bases:
>100_bases CGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAACTCGGTTGGAAGGCCATTCTGGCAGTACGCTCA GGATATGGCGCAGATACGCT
Product: ISSfl3 OrfC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MDISLLSTTSDPEQLRALAIAMVQKVMAENAELQNRIRILEEQMKLARQQRFGKKCESLAGMQRSLFEEDVDADIAEISA HLDKLLPQTGDEEKTTTRPVRKPLPSPLPRAEKVIPPAEERCPDCDAPLHFIRDEVSEKLEYIPAQVVVNRYIRPQYSCP CCEKVFSGKMPAHILPKSAVEPSVIAQVVISKYTDHLPLYRQQHIFSRMGVELPVSTMADMVGVAGAALAPLAKLLRHEL LTRDVIHADETSLRLLDTRKGGKSCSGWLWAYVSGERVSVNGAPY
Sequences:
>Translated_285_residues MDISLLSTTSDPEQLRALAIAMVQKVMAENAELQNRIRILEEQMKLARQQRFGKKCESLAGMQRSLFEEDVDADIAEISA HLDKLLPQTGDEEKTTTRPVRKPLPSPLPRAEKVIPPAEERCPDCDAPLHFIRDEVSEKLEYIPAQVVVNRYIRPQYSCP CCEKVFSGKMPAHILPKSAVEPSVIAQVVISKYTDHLPLYRQQHIFSRMGVELPVSTMADMVGVAGAALAPLAKLLRHEL LTRDVIHADETSLRLLDTRKGGKSCSGWLWAYVSGERVSVNGAPY >Mature_285_residues MDISLLSTTSDPEQLRALAIAMVQKVMAENAELQNRIRILEEQMKLARQQRFGKKCESLAGMQRSLFEEDVDADIAEISA HLDKLLPQTGDEEKTTTRPVRKPLPSPLPRAEKVIPPAEERCPDCDAPLHFIRDEVSEKLEYIPAQVVVNRYIRPQYSCP CCEKVFSGKMPAHILPKSAVEPSVIAQVVISKYTDHLPLYRQQHIFSRMGVELPVSTMADMVGVAGAALAPLAKLLRHEL LTRDVIHADETSLRLLDTRKGGKSCSGWLWAYVSGERVSVNGAPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 31823; Mature: 31823
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISLLSTTSDPEQLRALAIAMVQKVMAENAELQNRIRILEEQMKLARQQRFGKKCESLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMQRSLFEEDVDADIAEISAHLDKLLPQTGDEEKTTTRPVRKPLPSPLPRAEKVIPPAEE HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCCCCCCHHHCCCCHHH RCPDCDAPLHFIRDEVSEKLEYIPAQVVVNRYIRPQYSCPCCEKVFSGKMPAHILPKSAV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHCCCCCC EPSVIAQVVISKYTDHLPLYRQQHIFSRMGVELPVSTMADMVGVAGAALAPLAKLLRHEL CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTRDVIHADETSLRLLDTRKGGKSCSGWLWAYVSGERVSVNGAPY HHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCC >Mature Secondary Structure MDISLLSTTSDPEQLRALAIAMVQKVMAENAELQNRIRILEEQMKLARQQRFGKKCESLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMQRSLFEEDVDADIAEISAHLDKLLPQTGDEEKTTTRPVRKPLPSPLPRAEKVIPPAEE HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCCCCCCHHHCCCCHHH RCPDCDAPLHFIRDEVSEKLEYIPAQVVVNRYIRPQYSCPCCEKVFSGKMPAHILPKSAV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHCCCCCC EPSVIAQVVISKYTDHLPLYRQQHIFSRMGVELPVSTMADMVGVAGAALAPLAKLLRHEL CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTRDVIHADETSLRLLDTRKGGKSCSGWLWAYVSGERVSVNGAPY HHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]