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The map label for this gene is stfR [H]

Identifier: 209400529

GI number: 209400529

Start: 2578572

End: 2579891

Strand: Reverse

Name: stfR [H]

Synonym: ECH74115_2758

Alternate gene names: 209400529

Gene position: 2579891-2578572 (Counterclockwise)

Preceding gene: 209397600

Following gene: 209399740

Centisome position: 46.3

GC content: 59.77

Gene sequence:

>1320_bases
GTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTAGAGAACTGCACCATTCAACTGAA
AGCCAGACGGACCAGCAGCACGGTGGTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAAGCCGGTCGTTACAGCATGG
ACGTTGAGTACGGTCAGTACAGCGTCATTCTGTTGGTGGAGGGCTTCCCGCCGTCACATGCCGGGACCATCACCGTGTAT
GAAGATTCTCAACCGGGGACGCTGAATGATTTTCTCGGTGCCATGTCGGAGGATGACGTCCGGCCGGAGGCACTGCGTCG
TTTTGAACTGATGGTGGAAGAAGCGGCGCGTCACGCTGAGGAGGCGAAGAAGAATGCCGGAGAGGCGGAGACATCAGCGA
GGAATGCCGGCATATCATCCAGTAAGGCGGAAGCGAGCGCGGCAAATGCTGACACTTCAGCAGGGGATGCATTGGAGTCA
GCCCGGCAGGCGGCAGAAAGTGCAGCCGCTGCAAAGCAGTCAGAGGATGCGTCCTCGTCCTCGGCTTCTGCGGCCGCTCA
AAAAGCCAGTGAGTCATCACAAAGTGCAGCAGAAGCTGAATTGTCAAGAAAGACGGCAGAAAGTGCAGCCGGTAATGCAG
CCAGGGATGCAACGACCGCAACAGAAAAAGCCCGGGAGTCAGCAGAAAGCGCACAGTCAGCGGAACAAAGCAGGATAGCG
GCGGAAGAGGCCGTAAACCGAATCCCCACCGTGGTGGGACCTCCCGGGCCAAAGGGGGAACAGGGGCCCGCGGGTCCTCA
GGGGCCGAAGGGTGATAAGGGAGAGCGCGGTGACACCGGCCCTGTCGGGGCAACCGGCGAACGGGGACCGGCAGGTGATG
CTGGTCCGGCAGGCCCGCAGGGGCCGAAAGGTGACAGGGGAGAGCGGGGAGAGACCGGTCTGACGGGAAATGCAGGTCCA
CAGGGTCCAAAGGGAGATACCGGTGCGGCAGGCCCGGCAGGCCCACAGGGACCGAAAGGAGAAACAGGTGCGGCTGGCCC
GGTGGGGGCAACCGGACCTCAGGGGCCGAAGGGCGACCCGGGGGAGACGCAAATACGGTTCCGTCTGGGGCCGGGAAACA
TTATTGAGACAAACAGCAATGGCTGGTTCCCGGATACAGATGGTGCGCTCATCACCGGACTGACCTTTCTTGCCCCCAAA
GATACCACACGGGTTCAGGGTTTTTTTCAGCATTTGCAGGTCAGGTTTGGTGACGGGCCGTGGCAGGATGTTAAGGGGCT
GGATGAAGTGGGCAGTGATACAGGCAGAACAGGAGAATGA

Upstream 100 bases:

>100_bases
CGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTT
CAGGCGGGCTTTTTTGTGGG

Downstream 100 bases:

>100_bases
CATGAACATACTAAAAAAACTTATGCAGCGTCTGTGTGGTTGCGGAAAGCATGATGACCGTGAACACGGGGAGTTACTTA
CAGCACAGCTGCGACTGGGG

Product: tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNMAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVY
EDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISSSKAEASAANADTSAGDALES
ARQAAESAAAAKQSEDASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIA
AEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGP
QGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLAPK
DTTRVQGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Sequences:

>Translated_439_residues
MNMAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVY
EDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISSSKAEASAANADTSAGDALES
ARQAAESAAAAKQSEDASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIA
AEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGP
QGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLAPK
DTTRVQGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE
>Mature_439_residues
MNMAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVY
EDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISSSKAEASAANADTSAGDALES
ARQAAESAAAAKQSEDASSSSASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIA
AEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGP
QGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLAPK
DTTRVQGFFQHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI56847616, Length=153, Percent_Identity=41.8300653594771, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI65301115, Length=153, Percent_Identity=41.8300653594771, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI5803080, Length=111, Percent_Identity=47.7477477477478, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI55743098, Length=112, Percent_Identity=46.4285714285714, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI55743106, Length=112, Percent_Identity=46.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI240255535, Length=112, Percent_Identity=46.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI115392133, Length=126, Percent_Identity=49.2063492063492, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI115527062, Length=125, Percent_Identity=44, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI183583553, Length=111, Percent_Identity=42.3423423423423, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI115527066, Length=125, Percent_Identity=44, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI48762934, Length=130, Percent_Identity=47.6923076923077, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI115527070, Length=125, Percent_Identity=44, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI156616290, Length=101, Percent_Identity=43.5643564356436, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI111118976, Length=97, Percent_Identity=55.6701030927835, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI89363017, Length=131, Percent_Identity=46.5648854961832, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI110735435, Length=113, Percent_Identity=47.787610619469, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI98985806, Length=112, Percent_Identity=47.3214285714286, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI111118974, Length=97, Percent_Identity=55.6701030927835, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI98985810, Length=112, Percent_Identity=47.3214285714286, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI299523257, Length=112, Percent_Identity=47.3214285714286, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI4502961, Length=113, Percent_Identity=46.9026548672566, Blast_Score=65, Evalue=9e-11,
Organism=Homo sapiens, GI299523253, Length=112, Percent_Identity=47.3214285714286, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=88.6178861788618, Blast_Score=241, Evalue=8e-65,
Organism=Caenorhabditis elegans, GI17569903, Length=132, Percent_Identity=46.969696969697, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17551704, Length=202, Percent_Identity=33.6633663366337, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17535735, Length=136, Percent_Identity=41.9117647058824, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71989452, Length=138, Percent_Identity=37.6811594202899, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI221379533, Length=110, Percent_Identity=44.5454545454545, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221379525, Length=110, Percent_Identity=44.5454545454545, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 44422; Mature: 44422

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQY
CCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCE
SVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAE
EEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EAKKNAGEAETSARNAGISSSKAEASAANADTSAGDALESARQAAESAAAAKQSEDASSS
HHHHHCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
SASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQ
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLAPKDTTRVQGFFQHLQVRFGDGP
CCEEEEEEECCCCEEEECCCCCCCCCCCHHHHCEEEECCCCHHHHHHHHHHHHEEECCCC
WQDVKGLDEVGSDTGRTGE
CHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNMAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQY
CCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCE
SVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAE
EEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EAKKNAGEAETSARNAGISSSKAEASAANADTSAGDALESARQAAESAAAAKQSEDASSS
HHHHHCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
SASAAAQKASESSQSAAEAELSRKTAESAAGNAARDATTATEKARESAESAQSAEQSRIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEAVNRIPTVVGPPGPKGEQGPAGPQGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQ
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLAPKDTTRVQGFFQHLQVRFGDGP
CCEEEEEEECCCCEEEECCCCCCCCCCCHHHHCEEEECCCCHHHHHHHHHHHHEEECCCC
WQDVKGLDEVGSDTGRTGE
CHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]