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The map label for this gene is yjgB [H]

Identifier: 209400376

GI number: 209400376

Start: 5420931

End: 5421950

Strand: Reverse

Name: yjgB [H]

Synonym: ECH74115_5786

Alternate gene names: 209400376

Gene position: 5421950-5420931 (Counterclockwise)

Preceding gene: 209396718

Following gene: 209399989

Centisome position: 97.31

GC content: 55.0

Gene sequence:

>1020_bases
ATGTCGATGATAAAAAGCTATGCCGCAAAAGAAGCGGGCGGCGAACTGGAAGTTTATGAGTACGATCCCGGTGAGCTGAG
GCCACAAGATGTTGAAGTGCAGGTGGATTATTGCGGGATCTGCCATTCCGATCTATCGATGATCGACAATGAATGGGGAT
TTTCACAATATCCGCTGGTTGCCGGGCATGAGGTGATTGGGCGCGTGGTGGCGCTCGGGAGCGCCGCGCAGGATAAAGGT
TTGCAGGTCGGCCAGCGTGTCGGGATTGGCTGGACGGCGCGTAGCTGTGGTCACTGCGACGCCTGTATTAGCGGTAATCA
GATCAACTGCGAGCAAGGTGCTGTGCCGACGATTATGAATCGCGGTGGCTTTGCCGAGAAGTTGCGTGCGGACTGGCAAT
GGGTGATTCCACTGCCAGAAAATATTGATATCGAGTCCGCCGGGCCGCTGTTGTGCGGCGGTATCACGGTCTTTAAACCA
CTGTTGATGCACCATATCACTGCTACCAGCCGCGTTGGGGTAATTGGTATTGGCGGGCTGGGGCATATCGCTATAAAACT
TCTGCACGCAATGGGATGCGAGGTGACGGCCTTTAGTTCTAATCCGGCGAAAGAGCAGGAAGTACTGGCGATGGGTGCCG
ATAAAGTGGTGAATAGCCGCGATCCGCAGGCACTGAAAGCCCTGTCGGGGCAGTTTGATCTCATTATCAATACTGTGAAC
GTCAGCCTCGACTGGCAGCCTTATTTTGAGGCGCTGACCTATGGCGGTAATTTCCATACGGTCGGTGCGGTTCTCACGCC
GTTGCCGGTTCCGGCCTTTACGCTGATTGCGGGCGATCGCAGTGTCTCTGGCTCTGCTACCGGTACACCTTATGAGTTGC
GTAAGCTGATGCGCTTTGCCGCCCGCAGCAAGGTTGCGCCGACTACCGAATTGTTCCCGATGTCGAAAATTAACGATGCC
ATCAAGCATGTGCGCGACGGTAAGGCGCGTTACCGCGTGGTTCTGAAAGCTGACTTCTGA

Upstream 100 bases:

>100_bases
TCAGCATTGCATACAGCGATGTGTAACCTTTGTCACACTCCAGGCACCCCGCCCTGCCATGCTCTACACTTCCCAAACAA
CACCAGAGAAGGACCAAAAA

Downstream 100 bases:

>100_bases
TCTCTTTGCCGGGTGCCTGTCGCCCGGCACTTAAATCTCTTTGGAAGGCGTCTCGCAATCTGCTGAATTTAGCGGTGAAG
AGTGCGCAGCCGTTGCCTAT

Product: oxidoreductase, zinc-binding dehydrogenase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKG
LQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVN
VSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDA
IKHVRDGKARYRVVLKADF

Sequences:

>Translated_339_residues
MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKG
LQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVN
VSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDA
IKHVRDGKARYRVVLKADF
>Mature_338_residues
SMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGL
QVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPL
LMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVNV
SLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAI
KHVRDGKARYRVVLKADF

Specific function: Unknown

COG id: COG1064

COG function: function code R; Zn-dependent alcohol dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI87082401, Length=339, Percent_Identity=99.1150442477876, Blast_Score=698, Evalue=0.0,
Organism=Escherichia coli, GI1786518, Length=346, Percent_Identity=34.971098265896, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI87081918, Length=318, Percent_Identity=27.6729559748428, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1788075, Length=342, Percent_Identity=24.2690058479532, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI226510992, Length=285, Percent_Identity=25.2631578947368, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790718, Length=325, Percent_Identity=25.8461538461538, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71988145, Length=333, Percent_Identity=28.8288288288288, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17562584, Length=341, Percent_Identity=28.7390029325513, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17562582, Length=331, Percent_Identity=26.5861027190332, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6319949, Length=339, Percent_Identity=33.0383480825959, Blast_Score=155, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6323980, Length=330, Percent_Identity=31.2121212121212, Blast_Score=155, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6323961, Length=339, Percent_Identity=30.0884955752212, Blast_Score=131, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6319621, Length=346, Percent_Identity=30.3468208092486, Blast_Score=128, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6324486, Length=338, Percent_Identity=28.4023668639053, Blast_Score=121, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6323729, Length=338, Percent_Identity=27.810650887574, Blast_Score=117, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR006140
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 36528; Mature: 36397

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00059 ADH_ZINC ; PS00065 D_2_HYDROXYACID_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLV
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCEE
AGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMN
HHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCCCCCCHHHCCCCCCCCCCCCCCHHHC
RGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGL
CCCCHHHHCCCCEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEEECCH
GHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVN
HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCHHHHCCCCCHHHHHHHCCCEEEEEEEEE
VSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFA
EEECCCHHHHHHHCCCCEEEHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
ARSKVAPTTELFPMSKINDAIKHVRDGKARYRVVLKADF
HHCCCCCCHHCCCHHHHHHHHHHHHCCCEEEEEEEEECC
>Mature Secondary Structure 
SMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLV
CHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCEE
AGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMN
HHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEECCCCCCCHHHCCCCCCCCCCCCCCHHHC
RGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGL
CCCCHHHHCCCCEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEEECCH
GHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVN
HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCHHHHCCCCCHHHHHHHCCCEEEEEEEEE
VSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFA
EEECCCHHHHHHHCCCCEEEHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
ARSKVAPTTELFPMSKINDAIKHVRDGKARYRVVLKADF
HHCCCCCCHHCCCHHHHHHHHHHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]