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The map label for this gene is yiaA

Identifier: 209400282

GI number: 209400282

Start: 4576199

End: 4576636

Strand: Reverse

Name: yiaA

Synonym: ECH74115_4938

Alternate gene names: 209400282

Gene position: 4576636-4576199 (Counterclockwise)

Preceding gene: 209399370

Following gene: 209395792

Centisome position: 82.14

GC content: 41.1

Gene sequence:

>438_bases
ATGGACAACAAAATATCAACCTATTCACCGGCCTTTAGTATTGTGTCATGGATAGCTCTCGTTGGTGGTATCGTTACCTA
TCTGTTAGGGCTATGGAATGCAGAGATGCAGTTAAATGAAAAAGGATATTATTTTGCCGTACTGGTATTAGGACTGTTTT
CTGCGGCGTCTTATCAAAAGACCGTTCGGGACAAGTATGAAGGCATACCGACCACTTCCATTTATTATATGACCTGCCTG
ACTGTCTTTATTATCTCTGTTGCATTACTGATGGTAGGTCTGTGGAATGCGACATTATTACTCAGCGAAAAAGGTTTTTA
TGGACTGGCTTTCTTCTTAAGCTTGTTTGGTGCAGTAGCGGTGCAGAAAAATATTCGTGATGCCGGAATAAACCCACCAA
AAGAAACACAGGTTACCCAGGAAGAATACAGCGAATAA

Upstream 100 bases:

>100_bases
CATCGCCTTTTTTGTCTGCTTGTTTGGTCAAATGCGTTTGTTTCGCTCGGTATGAGCAACATAAAGCTCTTACACATTCA
GGAATGAAAGGAATACTGTG

Downstream 100 bases:

>100_bases
CTCACGTAAGCCCGGTCAGTCCAATGTGACCGGGCTTTTACTTAACTCACTAATCTGTTTCTGTCGATTCGTTGTACCAG
CATAGAAAGTAACAAACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCL
TVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE

Sequences:

>Translated_145_residues
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCL
TVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE
>Mature_145_residues
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCL
TVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082292, Length=145, Percent_Identity=100, Blast_Score=294, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIAA_ECOLI (P0ADJ8)

Other databases:

- EMBL:   K01996
- EMBL:   X04691
- EMBL:   U00039
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_004230.1
- RefSeq:   NP_418019.4
- ProteinModelPortal:   P0ADJ8
- STRING:   P0ADJ8
- EnsemblBacteria:   EBESCT00000003309
- EnsemblBacteria:   EBESCT00000015196
- GeneID:   948078
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3534
- KEGG:   eco:b3562
- EchoBASE:   EB1172
- EcoGene:   EG11186
- eggNOG:   COG4682
- GeneTree:   EBGT00050000009929
- HOGENOM:   HBG375240
- OMA:   YYGLSWV
- ProtClustDB:   PRK11383
- BioCyc:   EcoCyc:EG11186-MONOMER
- Genevestigator:   P0ADJ8
- InterPro:   IPR008024

Pfam domain/function: PF05360 YiaAB

EC number: NA

Molecular weight: Translated: 16123; Mature: 16123

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10e25070)-; HASH(0x128c0c4c)-; HASH(0x10cb7708)-; HASH(0x11917874)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHH
TVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
VQKNIRDAGINPPKETQVTQEEYSE
HHHHHHHCCCCCCCCCCCCHHHCCH
>Mature Secondary Structure
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHH
TVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
VQKNIRDAGINPPKETQVTQEEYSE
HHHHHHHCCCCCCCCCCCCHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503