Definition Escherichia coli O157:H7 str. EC4115, complete genome.
Accession NC_011353
Length 5,572,075

Click here to switch to the map view.

The map label for this gene is ygfJ [H]

Identifier: 209400270

GI number: 209400270

Start: 3857708

End: 3858286

Strand: Direct

Name: ygfJ [H]

Synonym: ECH74115_4167

Alternate gene names: 209400270

Gene position: 3857708-3858286 (Clockwise)

Preceding gene: 209400118

Following gene: 209398177

Centisome position: 69.23

GC content: 43.18

Gene sequence:

>579_bases
ATGTCAGCCATCGACTGTATAATTACCGCTGCCGGATTATCATCAAGAATGGGGCAATGGAAAATGATGTTACCCTGGCA
ACAGGGGACAATTCTTGATACAAGTATCAAAAATGCGTTGCAGTTTTGTAGCCGAATTATTTTAGTCACCGGCTATCGTG
GTAATGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATCCACAACCCAGATTATGCGCAGGGTTTACTA
ACATCAGTAAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCAT
CGATATTTTCAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGA
TTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCAAGCGCCCCAATATCACCAATATGCGTCAGGCACTCCTTATGGGA
GCTCATTATTCCGTCGAAGTAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGCAAAA
AAGGTATACTAAAATTTAA

Upstream 100 bases:

>100_bases
GTCTTTATGACCTCTCTGGGATAAATTATCCCCAACTTAATCCATCAGGAAGTAACGCAATTATCAGGCGTTATTAGCCC
CTATAAATAATGGAACCACT

Downstream 100 bases:

>100_bases
AAAACGTAGTTAAACGATTGCGTTCAAATATTTAATCCCTCCAGCACTCTTTATCATAATGATAAGGAATCACTGATTTT
GAGAAAAGAGAAAAAGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL
TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMG
AHYSVEVENAEIILDIDTPDDFITAQKRYTKI

Sequences:

>Translated_192_residues
MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL
TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMG
AHYSVEVENAEIILDIDTPDDFITAQKRYTKI
>Mature_191_residues
SAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLT
SVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMGA
HYSVEVENAEIILDIDTPDDFITAQKRYTKI

Specific function: Unknown

COG id: COG2068

COG function: function code R; Uncharacterized MobA-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789242, Length=192, Percent_Identity=95.8333333333333, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017696 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21467; Mature: 21336

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER
CCHHHHEEECCCHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHEEEEECCCCCHHHHH
YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG
HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCC
AILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMGAHYSVEVENAEIILDIDTPD
EEEEECCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCC
DFITAQKRYTKI
HHHHHHHHHCCC
>Mature Secondary Structure 
SAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER
CHHHHEEECCCHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHEEEEECCCCCHHHHH
YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG
HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCC
AILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMGAHYSVEVENAEIILDIDTPD
EEEEECCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCC
DFITAQKRYTKI
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]