| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ygfJ [H]
Identifier: 209400270
GI number: 209400270
Start: 3857708
End: 3858286
Strand: Direct
Name: ygfJ [H]
Synonym: ECH74115_4167
Alternate gene names: 209400270
Gene position: 3857708-3858286 (Clockwise)
Preceding gene: 209400118
Following gene: 209398177
Centisome position: 69.23
GC content: 43.18
Gene sequence:
>579_bases ATGTCAGCCATCGACTGTATAATTACCGCTGCCGGATTATCATCAAGAATGGGGCAATGGAAAATGATGTTACCCTGGCA ACAGGGGACAATTCTTGATACAAGTATCAAAAATGCGTTGCAGTTTTGTAGCCGAATTATTTTAGTCACCGGCTATCGTG GTAATGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATCCACAACCCAGATTATGCGCAGGGTTTACTA ACATCAGTAAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCAT CGATATTTTCAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGA TTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCAAGCGCCCCAATATCACCAATATGCGTCAGGCACTCCTTATGGGA GCTCATTATTCCGTCGAAGTAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGCAAAA AAGGTATACTAAAATTTAA
Upstream 100 bases:
>100_bases GTCTTTATGACCTCTCTGGGATAAATTATCCCCAACTTAATCCATCAGGAAGTAACGCAATTATCAGGCGTTATTAGCCC CTATAAATAATGGAACCACT
Downstream 100 bases:
>100_bases AAAACGTAGTTAAACGATTGCGTTCAAATATTTAATCCCTCCAGCACTCTTTATCATAATGATAAGGAATCACTGATTTT GAGAAAAGAGAAAAAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMG AHYSVEVENAEIILDIDTPDDFITAQKRYTKI
Sequences:
>Translated_192_residues MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMG AHYSVEVENAEIILDIDTPDDFITAQKRYTKI >Mature_191_residues SAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLT SVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMGA HYSVEVENAEIILDIDTPDDFITAQKRYTKI
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789242, Length=192, Percent_Identity=95.8333333333333, Blast_Score=390, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017696 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21467; Mature: 21336
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER CCHHHHEEECCCHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHEEEEECCCCCHHHHH YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCC AILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMGAHYSVEVENAEIILDIDTPD EEEEECCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCC DFITAQKRYTKI HHHHHHHHHCCC >Mature Secondary Structure SAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER CHHHHEEECCCHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHEEEEECCCCCHHHHH YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCC AILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMGAHYSVEVENAEIILDIDTPD EEEEECCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCC DFITAQKRYTKI HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]