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The map label for this gene is yggT

Identifier: 209400119

GI number: 209400119

Start: 3941723

End: 3942289

Strand: Direct

Name: yggT

Synonym: ECH74115_4255

Alternate gene names: 209400119

Gene position: 3941723-3942289 (Clockwise)

Preceding gene: 209395868

Following gene: 209399373

Centisome position: 70.74

GC content: 51.5

Gene sequence:

>567_bases
ATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTG
GGCTCATTGTGATTTTTACAACCCCTTCTCACAGTTTGTAGTGAAGGTAACGCAGCCAATTATCGGGCCACTGCGCCGCG
TTATTCCGGCAATGGGACCCATTGATAGCGCCTCGCTGCTGGTTGCCTATATTCTCAGTTTTATCAAAGCCATCGTGCTG
TTTAAAGTGGTGACCTTCCTGCCAATCATCTGGATTGCCGGTTTACTGATTCTGCTGAAAACCATCGGCCTGCTGATTTT
CTGGGTCCTGCTGGTGATGGCGATTATGAGCTGGGTAAGCCAGGGCCGTAGCCCGATTGAATACGTGCTGATTCAGCTGG
CCGATCCGCTGCTGCGCCCGATTCGCCGCTTGCTACCGGCAATGGGGGGGATTGATTTCTCGCCGATGATCCTCGTTCTG
CTGCTGTATGTCATCAATATGGGTGTCGCAGAAGTATTACAGGCGACCGGAAATATGCTGCTGCCGGGGCTGTGGATGGC
GTTATGA

Upstream 100 bases:

>100_bases
TGGAAGCCGCCATTGCGGCAGGTAGCACGATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAA
TAAGGAATTAAAGGAACGCC

Downstream 100 bases:

>100_bases
GTGCCGTAACAGTTAACGATGACGGTCTGGTTTTACGGCTCTATATTCAGCCGAAAGCCAGCCGTGATTCTATTGTCGGT
TTACATGGCGACGAGGTAAA

Product: YGGT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVL
FKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
LLYVINMGVAEVLQATGNMLLPGLWMAL

Sequences:

>Translated_188_residues
MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVL
FKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
LLYVINMGVAEVLQATGNMLLPGLWMAL
>Mature_188_residues
MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVL
FKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
LLYVINMGVAEVLQATGNMLLPGLWMAL

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family

Homologues:

Organism=Escherichia coli, GI1789322, Length=188, Percent_Identity=100, Blast_Score=365, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGGT_ECO57 (P64566)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D91107
- PIR:   G85952
- RefSeq:   NP_289524.1
- RefSeq:   NP_311855.1
- ProteinModelPortal:   P64566
- EnsemblBacteria:   EBESCT00000025153
- EnsemblBacteria:   EBESCT00000060012
- GeneID:   916342
- GeneID:   957823
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4297
- KEGG:   ecs:ECs3828
- GeneTree:   EBGT00050000011319
- HOGENOM:   HBG518921
- OMA:   QYVPFWA
- ProtClustDB:   CLSK880541
- BioCyc:   ECOL83334:ECS3828-MONOMER
- InterPro:   IPR003425

Pfam domain/function: PF02325 YGGT

EC number: NA

Molecular weight: Translated: 21168; Mature: 21168

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xefcdabc)-; HASH(0x11451834)-; HASH(0x113aeddc)-; HASH(0x10f9f200)-; HASH(0xb72d0ec)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
IDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYVINMGVAEVLQATGNML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LPGLWMAL
HHHHHHHH
>Mature Secondary Structure
MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
IDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYVINMGVAEVLQATGNML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LPGLWMAL
HHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796