| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ydiH
Identifier: 209400116
GI number: 209400116
Start: 2270941
End: 2271129
Strand: Reverse
Name: ydiH
Synonym: ECH74115_2400
Alternate gene names: 209400116
Gene position: 2271129-2270941 (Counterclockwise)
Preceding gene: 209399366
Following gene: 209399898
Centisome position: 40.76
GC content: 43.92
Gene sequence:
>189_bases ATGTCTACTCAACTTGATCCCACCCAGCTGGCCATTGAATTTTTACGCCGTGACCAGAGCAATCTTTCACCTGCCCAATA TCTTAAACGTCTGAAACAACTAGAACTTGAATTTGCTGACCTGCTTACTCTCTCTTCTGCTGAATTAAAAGAAGAAATCT ACTTTGCCTGGCGTCTGGGCGTGCATTGA
Upstream 100 bases:
>100_bases ACGTTGTCACCAGAAAAGTGTGACGCATATTGCTTTTGGTCATTATCTGCACAGTAAACGGTGGTATACTGTGCAGGTCT TGTCTAAAAGCGAGGATGCT
Downstream 100 bases:
>100_bases TCCTGACTTAATGCCGCAAGTTCGCCAAATCGACCTGGATTAACCTCCGTCCAGGTTCGATGACCTTCTTAATACTGCTT ATCTACCCGCCTGATATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLGVH
Sequences:
>Translated_62_residues MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLGVH >Mature_61_residues STQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLGVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510945, Length=62, Percent_Identity=100, Blast_Score=125, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YDIH_ECO57 (P64477)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: D85776 - PIR: H90927 - RefSeq: NP_288119.1 - RefSeq: NP_310419.1 - EnsemblBacteria: EBESCT00000027904 - EnsemblBacteria: EBESCT00000056619 - GeneID: 914135 - GeneID: 961656 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z2713 - KEGG: ecs:ECs2392 - GeneTree: EBGT00050000011001 - HOGENOM: HBG416227 - OMA: PAQYLKK - ProtClustDB: CLSK880162 - BioCyc: ECOL83334:ECS2392-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7266; Mature: 7135
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLG CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC VH CC >Mature Secondary Structure STQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLG CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC VH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796