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The map label for this gene is ytfB [H]

Identifier: 209400063

GI number: 209400063

Start: 5358753

End: 5359391

Strand: Reverse

Name: ytfB [H]

Synonym: ECH74115_5723

Alternate gene names: 209400063

Gene position: 5359391-5358753 (Counterclockwise)

Preceding gene: 209398714

Following gene: 209399021

Centisome position: 96.18

GC content: 55.24

Gene sequence:

>639_bases
ATGCCCGGGCGCTTTGAACTAAAACCAACCCTGGAGAAAGTCTGGCACGCACCGGACAATTTTCGCTTCATGGACCCGCT
GCCGCCGATGCATCGTCGGGGGATCATTATTGCCGCCATTGTATTGGTGGTCGGATTTCTGCTTCCATCTGATGATACGC
CCAACGCGCCGGTGGTGACGCGTGAAGCGCAGTTAGATATTCAGTCGCAATCACAACCGCCGACAGAAGAACAGCTGCGG
GCGCAATTAGTCACCCCACAAAATTATCCTGATCAGGTGGCTCCGGTCGCTCCAGAACCTATACAGGAAGGCCAGCCAGA
AGAACAGCCGAAAACTACCCAAACGCAACCATTCCAGCCAGATAGCGGAATTGATAATCAATGGCGCTCTTACCGTGTCG
AACCCGGTAAAACGATGGCGCAGCTGTTCCGCGACCACGGACTGCCCGCTACCGATGTCTATGCAATGGCGCAGGTAGAA
GGCGCGGGTAAGCCGCTGAGTAATTTGCAAAACGGGCAGATGGTGAAAATCCGCCAGAACGCCAGCGGCGTGGTGACGGG
CTTAACCATTGATACGGGGAATAATCAACAGGTCCTGTTCACCCGCCAGCCGGATGGCAGTTTTATTCGTGCGCGGTAG

Upstream 100 bases:

>100_bases
CCCGTATGAATATAATAAAGGCGGGTTTACCACGGACATCATAGCGTTAGCTTATTCATAGGCTATGATTGAGGAACAAG
ACGCGGAGCAGGAGGAAACC

Downstream 100 bases:

>100_bases
ATGAAGGGTCAACCAAAAGCCAGCTAAGGATTGTCTCTTTGATGACCTTACGTCTGGCTTCCAGTGCCTGGGGTGAAACC
ATACTGATGTGTTGACATCC

Product: opacity-associated family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLR
AQLVTPQNYPDQVAPVAPEPIQEGQPEEQPKTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVE
GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR

Sequences:

>Translated_212_residues
MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLR
AQLVTPQNYPDQVAPVAPEPIQEGQPEEQPKTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVE
GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
>Mature_211_residues
PGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRA
QLVTPQNYPDQVAPVAPEPIQEGQPEEQPKTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEG
AGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR

Specific function: Unknown

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082389, Length=212, Percent_Identity=99.0566037735849, Blast_Score=425, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013731
- InterPro:   IPR007340 [H]

Pfam domain/function: PF04225 OapA; PF08525 OapA_N [H]

EC number: NA

Molecular weight: Translated: 23554; Mature: 23423

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVT
CCCCCCCCHHHHHHHCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEE
REAQLDIQSQSQPPTEEQLRAQLVTPQNYPDQVAPVAPEPIQEGQPEEQPKTTQTQPFQP
ECCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
DSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQN
CCCCCCHHHEEECCCCHHHHHHHHHCCCCHHHHHEEEEECCCCCCHHHCCCCCEEEEEEC
ASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
CCCEEEEEEEECCCCCEEEEEECCCCCEEECC
>Mature Secondary Structure 
PGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVT
CCCCCCCHHHHHHHCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEE
REAQLDIQSQSQPPTEEQLRAQLVTPQNYPDQVAPVAPEPIQEGQPEEQPKTTQTQPFQP
ECCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
DSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQN
CCCCCCHHHEEECCCCHHHHHHHHHCCCCHHHHHEEEEECCCCCCHHHCCCCCEEEEEEC
ASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR
CCCEEEEEEEECCCCCEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]