| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209400018
Identifier: 209400018
GI number: 209400018
Start: 3249970
End: 3251595
Strand: Reverse
Name: 209400018
Synonym: ECH74115_3504
Alternate gene names: NA
Gene position: 3251595-3249970 (Counterclockwise)
Preceding gene: 209398158
Following gene: 209400413
Centisome position: 58.36
GC content: 51.17
Gene sequence:
>1626_bases ATGCCCTATATCGATATCACCACGATGCGTGGGATGATGCCGCGCGTTGTGACATCCATGCTGCCCGAGCATTCCGCTGT ACTGGCGGAGGACTGCCATTTCCGGTTTGGTGTTATTACACCAGAACGTCAGATATCCGGGGTTGAGAAAACATTCACAA TTAAGCCAAAAACAATTTTTCATTACCGTGACGATTTCTGGTTTGCATGGCCGGATGTGGTGGATGTGATCCGCAGTCCG ATCGCTCAGGACCCCCACGGGCGTATTTACTACACTGACGGGCGTTTTCCTAAAGTGACGGATGCGACTATTGCCACAAA AGGGGACGGGAATCACCCGACATCATCGTATCGTCTGGGGATCCCCGCGCCGACGACAGCTCCTGTCTGTACTGTTCAGC AGGGCGGTGATGTTTCTGACGATAACCCGAATGATGACGAAACCCGGTTTTATACTGAAACCTTTGTCTCAGATTATGGT GAAGAAGGTCCGCCTGGTCCGGCGTCTCTGGAGGTAACACTCCGTACTCCGGGGACTGCGGTACAACTGACGCTGGCTCC GGTGCCATTGCAGAATGCCAATATTAAACGTCGCCGGATTTATCGCTCTGCATCAGGTGGAGGAGAAGCGGATTTTTTAC TTGTGGCTGAACTGGATGCGTCAGTGCTCAGTTACACGGACAAAATACCGACGAAAAACCTTGGGCCTTCCCTGGCAACA TGGGATTACCTGCCGCCACCGGAGAATATGACGGGTCTTTGCCTGATGGCTAATGGTATTGCTGCCGGGTTTGCCGGTAA TGAAGTGATGTTTTCGGAAGCGTATCTGCCGTATGCATGGCCGGAAGTGAATCGTCACACGACGGCAGAAGATATTGTGG CTATCTGTCCGCTGGGAACGTCACTGGTGGTGGCGACAAAGGGGGAGCCTTATCTGTTCAGTGGTGTATCGCCTTCCACA ATTTCTGGCTCCAGAATTCCTTCCATGCAGGCATGCCTGAGCCGAAGAAGCATGGTGGCGATGGAGGGATTCGTACTGTA TGCCGGGACAAACGGTCTGGTATCTGTTGATGTAAACGGTAATACAGCACTGGCAACGGAAAAGATTATTTCACCAGAAC AGTGGCAGAGTCAGTTTAACCCGATGTCCATTGTGGCTTATTCCTGGCGTGGTGACTATATCGGTTGTTACACAAAACCG GATGGTAAGCAGGATGTGTTTGTATTCAGTCCGGCGAACATGGATATCCGTTATCTCAGCACGCCGTTTGACTGTGCATG GATTGATCTTGCAAAAGATATGATGCGCGTGGTGACAGGGGACAAAATGTCAGTGCTTGCCGGGGACTCTCTGCCGTCCA TGATAAGGTGGCATTCAAAAATTTTTTCATTACCTGAAAGAACCTCTTTTTCCTGTATCAGAGTGAAATCTCCGGCACCT GAGCGGGTGGGGATCACTGTTATGGCTGATGATGTTCCTGTGATTCATTTTGCGCCGGGTACGTTTAAGGGAAGTGTGGT GAGACTTCCGGCAGCAACCGGGCAAAACTGGCAGGTGATGGTATCCGGATTCGGGCAGGTGGAACGAATAACCCTGAGTA CATCGATGTCGGAGATGCCGGTATGA
Upstream 100 bases:
>100_bases TCATGCAAGGCATTTTGTTTCAGTGATGCCGATCGCGATTTTAGCGAATTCCATCATAAATCCCCTGATTTTTAAGCCTG AAGCAGTCAAAGGAATTTCT
Downstream 100 bases:
>100_bases CCAGAAAACCGTGGCGTGCGGGGAAGGATTTATCCACAGTTGTGGAGAACATGGAAATTGGCACCGGGCAGCGTGGTGAC GGACGCCACGCATTTGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSP IAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYG EEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNANIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPTKNLGPSLAT WDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAICPLGTSLVVATKGEPYLFSGVSPST ISGSRIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDVNGNTALATEKIISPEQWQSQFNPMSIVAYSWRGDYIGCYTKP DGKQDVFVFSPANMDIRYLSTPFDCAWIDLAKDMMRVVTGDKMSVLAGDSLPSMIRWHSKIFSLPERTSFSCIRVKSPAP ERVGITVMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLSTSMSEMPV
Sequences:
>Translated_541_residues MPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSP IAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYG EEGPPGPASLEVTLRTPGTAVQLTLAPVPLQNANIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPTKNLGPSLAT WDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAICPLGTSLVVATKGEPYLFSGVSPST ISGSRIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDVNGNTALATEKIISPEQWQSQFNPMSIVAYSWRGDYIGCYTKP DGKQDVFVFSPANMDIRYLSTPFDCAWIDLAKDMMRVVTGDKMSVLAGDSLPSMIRWHSKIFSLPERTSFSCIRVKSPAP ERVGITVMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLSTSMSEMPV >Mature_540_residues PYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTIKPKTIFHYRDDFWFAWPDVVDVIRSPI AQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLGIPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGE EGPPGPASLEVTLRTPGTAVQLTLAPVPLQNANIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPTKNLGPSLATW DYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAICPLGTSLVVATKGEPYLFSGVSPSTI SGSRIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDVNGNTALATEKIISPEQWQSQFNPMSIVAYSWRGDYIGCYTKPD GKQDVFVFSPANMDIRYLSTPFDCAWIDLAKDMMRVVTGDKMSVLAGDSLPSMIRWHSKIFSLPERTSFSCIRVKSPAPE RVGITVMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLSTSMSEMPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59157; Mature: 59026
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTIKPKTIF CCEEEEHHHHHHHHHHHHHHCCCCCEEHHHCCCEEEEECCCHHHHCCCCEEEEECCCEEE HYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLG EECCCCEEECHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEC IPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTA CCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEECCCCE VQLTLAPVPLQNANIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPTKNLGPSLAT EEEEEECCCCCCCCCHHHHEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCC WDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAICPLGT CCCCCCCCCCCEEEEEECCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHEEEEECCCC SLVVATKGEPYLFSGVSPSTISGSRIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDVNG EEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEEEEECCCCEEEEEECC NTALATEKIISPEQWQSQFNPMSIVAYSWRGDYIGCYTKPDGKQDVFVFSPANMDIRYLS CEEEEHHHCCCHHHHHHHCCCEEEEEEEECCCEEEEEECCCCCCEEEEECCCCCEEEEEC TPFDCAWIDLAKDMMRVVTGDKMSVLAGDSLPSMIRWHSKIFSLPERTSFSCIRVKSPAP CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC ERVGITVMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLSTSMSEMP CCEEEEEEECCCCEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEECCHHHCC V C >Mature Secondary Structure PYIDITTMRGMMPRVVTSMLPEHSAVLAEDCHFRFGVITPERQISGVEKTFTIKPKTIF CEEEEHHHHHHHHHHHHHHCCCCCEEHHHCCCEEEEECCCHHHHCCCCEEEEECCCEEE HYRDDFWFAWPDVVDVIRSPIAQDPHGRIYYTDGRFPKVTDATIATKGDGNHPTSSYRLG EECCCCEEECHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEC IPAPTTAPVCTVQQGGDVSDDNPNDDETRFYTETFVSDYGEEGPPGPASLEVTLRTPGTA CCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEECCCCE VQLTLAPVPLQNANIKRRRIYRSASGGGEADFLLVAELDASVLSYTDKIPTKNLGPSLAT EEEEEECCCCCCCCCHHHHEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCC WDYLPPPENMTGLCLMANGIAAGFAGNEVMFSEAYLPYAWPEVNRHTTAEDIVAICPLGT CCCCCCCCCCCEEEEEECCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHEEEEECCCC SLVVATKGEPYLFSGVSPSTISGSRIPSMQACLSRRSMVAMEGFVLYAGTNGLVSVDVNG EEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEEEEECCCCEEEEEECC NTALATEKIISPEQWQSQFNPMSIVAYSWRGDYIGCYTKPDGKQDVFVFSPANMDIRYLS CEEEEHHHCCCHHHHHHHCCCEEEEEEEECCCEEEEEECCCCCCEEEEECCCCCEEEEEC TPFDCAWIDLAKDMMRVVTGDKMSVLAGDSLPSMIRWHSKIFSLPERTSFSCIRVKSPAP CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC ERVGITVMADDVPVIHFAPGTFKGSVVRLPAATGQNWQVMVSGFGQVERITLSTSMSEMP CCEEEEEEECCCCEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEECCHHHCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA