Definition Escherichia coli O157:H7 str. EC4115, complete genome.
Accession NC_011353
Length 5,572,075

Click here to switch to the map view.

The map label for this gene is nikA

Identifier: 209399938

GI number:

Start: 4451349

End: 4452923

Strand: Direct

Name: nikA

Synonym: ECH74115_4816

Alternate gene names: NA

Gene position: NA

Preceding gene: 209396708

Following gene: 209400123

Centisome position: NA

GC content: NA

Gene sequence:

>1575_bases
ATGCTCTCCACACTCCGCCGCACTCTATTTGCGCTGCTGGCTTGTGCGTCTTTTATCGTCCATGCCGCTGCACCAGATGA
AATCACCACCGCCTGGCCGGTGAATGTCGGGCCACTAAACCCGCACCTTTACACGCCTAACCAGATGTTCGCCCAGAGCA
TGGTTTATGAACCATTGGTGAAATATCAGGCAGACGGTTCGGTGATCCCGTGGCTGGCAAAAAGCTGGACTCATTCAGAA
GATGGTAAAACCTGGACCTTCACCCTGCGTGATGACGTGAAATTCTCTAACGGCGAACCGTTTGATGCAGAGGCGGCGGC
AGAAAACTTCCGCGCAGTGCTCGATAACCGTCAACGTCACGCCTGGCTGGAGCTGGCAAACCAGATTGTTGATGTTAAAG
CACTCAGTAAAACAGAGCTGCAAATCACCCTGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCGCGCCCT
TTCCGCTTTATCGCCCCCTCGCAGTTTAAAAACCATGAAACCATGAACGGGATTAAAGCGCCGATTGGCACCGGACCGTG
GGTTTTGCAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCAATTA
AGAAGATCACTTTTAACGTCATCCCAGACCCGACTACCCGCGCGGTGGCGTTTGAAACTGGCGATATCGACCTGCTGTAC
GGAAACGAAGGGTTATTACCGCTCGATACCTTCGCCCGCTTTAGCCAGAACCCGGCTTACCATACCCAACTGTCACAGCC
GATCGAAACCGTGATGCTGGCGCTTAATACCGCCAAAGCCCCCACCAATGAGCTGGCAGTACGTGAAGCTCTTAATTACG
CGGTAAACAAAAAATCGCTGATTGATAACGCGTTGTATGGCACCCAGCAGGTCGCCGACACCCTGTTTGCCCCTTCTGTG
CCCTACGCCAACCTCGGCCTGAAACCGCGCCAGTACGATCCGCAGAAAGCGAAAGCGTTGCTGGAAAAAGCCGGTTGGAC
GCTGCCTGCGGGCAAAGACATCCGCGAGAAAAATGGTCAGCCGCTGCACATTGAACTTTCGTTCATCGGCACCGATGCGT
TAAGCAAATCGATGGCGGAAATCATTCAGGCTGATATGCGCCAGATTGGCGCAGATGTCTCGCTGATTGGCGAAGAAGAG
AGCAGTATCTATGCGCGTCAGCGCGACGGTCGTTTTGGCATGATTTTCCACCGCACCTGGGGCGCGCCATACGATCCACA
CGCCTTCCTGAGTTCAATGCGCGTACCGTCGCACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAGCCGCTGATTG
ATAAAGAGATCGGCGAAGTGCTGGCGACCCATGACGAAGCACAACGTCAGGCACTGTATCGCGACATTCTGACCCGTCTG
CATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGTAACATCCCCTA
CGCGCCGATCGCCACCGAAATTCCGTTCGAACAGATTAAACCGGTGAAACCTTAA

Upstream 100 bases:

>100_bases
CGACTGCCCATCTATTGATCCAGAACAGGTAATCAGTATGACGAATACTTAAAATCGTCATACTTATTTCCGCCATCTAT
TTTAATCCATTGGGGTTACC

Downstream 100 bases:

>100_bases
TGTTGCGTTACGTATTACGCCGCTTTCTGCTGCTGATCCCGATGGTGCTCGCCGCCTCGGTGATCATTTTTCTGATGCTG
CGCCTCGGTACCGGCGACCC

Product: nickel ABC transporter, periplasmic nickel-binding protein NikA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>524_residues
MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSE
DGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
FRFIAPSQFKNHETMNGIKAPIGTGPWVLQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLY
GNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTAKAPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSV
PYANLGLKPRQYDPQKAKALLEKAGWTLPAGKDIREKNGQPLHIELSFIGTDALSKSMAEIIQADMRQIGADVSLIGEEE
SSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDEAQRQALYRDILTRL
HDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQIKPVKP

Sequences:
NA

Specific function: NA

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA