Click here to switch to the map view.

The map label for this gene is yhdN [H]

Identifier: 209399921

GI number: 209399921

Start: 4277233

End: 4277601

Strand: Reverse

Name: yhdN [H]

Synonym: ECH74115_4615

Alternate gene names: 209399921

Gene position: 4277601-4277233 (Counterclockwise)

Preceding gene: 209399907

Following gene: 209400338

Centisome position: 76.77

GC content: 47.97

Gene sequence:

>369_bases
ATGTGGTTACTTGACCAGTGGGCAGAGCGCCATATAGCAGAAGCGCAAGCGAAAGGTGAGTTTGATAACCTGGCAGGTAG
CGGCGAACCATTGATACTGGATGATGATTCTCATGTGCCACCGGAATTACGTGCGGGGTATCGCTTGCTGAAGAATGCCG
GTTGCTTACCGCCAGAACTTGAGCAACGGAGGGAAGCAATCCAGCTTCTGGATATCCTCAAAGGTATCCGTCACGATGAT
CCGCAATATCAAGAGGTTAGCCGTCGATTGTCATTACTGGAATTGAAGCTGCGACAAGCTGGATTGAGTACCGATTTTTT
ACGCGGCGATTATGCTGACAAGTTGTTGAATAAAATCAACGATAACTAG

Upstream 100 bases:

>100_bases
GCAACGTAAAAAAACCCGCCCCGGCGGGTTTTTTTATACCCGTAGCATCCCCACTTATCTACAATAGCTGTACTCTTTTT
GTTCATCCCCTGGAGTATTT

Downstream 100 bases:

>100_bases
TGGAGTATGTATGTATCGCATTGGTGAGCTGGCAAAAATGGCGGAAGTAACACCCGACACGATTCGTTATTACGAAAAGC
AGCAGATGATGGAGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN

Sequences:

>Translated_122_residues
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN
>Mature_122_residues
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789688, Length=122, Percent_Identity=99.1803278688525, Blast_Score=243, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018961 [H]

Pfam domain/function: PF09350 DUF1992 [H]

EC number: NA

Molecular weight: Translated: 13944; Mature: 13944

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
EQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKIN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DN
CC
>Mature Secondary Structure
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
EQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKIN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503 [H]