| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is phnJ [H]
Identifier: 209399888
GI number: 209399888
Start: 5248816
End: 5249661
Strand: Reverse
Name: phnJ [H]
Synonym: ECH74115_5611
Alternate gene names: 209399888
Gene position: 5249661-5248816 (Counterclockwise)
Preceding gene: 209398848
Following gene: 209400505
Centisome position: 94.21
GC content: 58.75
Gene sequence:
>846_bases ATGGCTAATCTGAGCGGCTACAACTTTGCCTACCTCGACGAGCAGACCAAACGCATGATCCGCCGCGCCATCTTAAAAGC GGTGGCGATCCCCGGTTATCAGGTGCCGTTTGGCGGGCGCGAGATGCCAATGCCGTACGGCTGGGGAACCGGCGGCATTC AGCTTACCGCCAGCGTGATTGGCGAAAGCGACGTGCTGAAGGTGATTGACCAGGGCGCGGATGACACCACCAACGCCGTG TCGATTCGCAACTTCTTTAAGCGCGTGACCGGGGTAAACACCACCGAGCGCACGGACGATGCAACGGTCATCCAGACGCG TCACCGCATCCCCGAAACGCCGCTGACCGAAGATCAGATCATTATTTTCCAGGTGCCGATCCCCGAACCGCTGCGCTTTA TCGAGCCGCGCGAAACGGAAACCCGCACCATGCACGCGCTGGAGGAATACGGCGTGATGCAGGTGAAGCTGTATGAAGAT ATCGCCCGCTTCGGTCATATCGCCACCACCTACGCCTATCCGGTGAAGGTGAACGGGCGCTACGTAATGGACCCGTCGCC GATCCCGAAATTCGATAACCCGAAAATGGACATGATGCCCGCCCTGCAACTCTTCGGCGCCGGGCGTGAGAAGCGCATCT ATGCGGTGCCGCCGTTTACCCGCGTGGAAAGCCTCGATTTCGACGATCACCCGTTCACCGTTCAGCAGTGGGATGAGCCA TGCGCCATCTGCGGATCGACCCACAGCTATCTTGATGAAGTGGTGCTGGATGACGCCGGAAACCGCATGTTTGTCTGCTC CGATACCGATTATTGCCGCCAACAGAGCGAGGCAAAAAGCCAATGA
Upstream 100 bases:
>100_bases GTCGAAGCCGCAGGCTTTGTCTCGCACCTCAAACTCCCGCACTACGTCGATTTCCAGGCCGAACTGGAGCTACTCAAACG TCTGCAACAGGAGCAGAACC
Downstream 100 bases:
>100_bases ATCAACCGTTACTTTCGGTCAATAACCTGACCCACCTTTACGCGCCGGGCAAAGGCTTTAGCGATGTCTCTTTTGATTTA TGGCCGGGGGAAGTGCTGGG
Product: phosphonate metabolism protein PhnJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAV SIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKSQ
Sequences:
>Translated_281_residues MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAV SIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKSQ >Mature_280_residues ANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVS IRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDI ARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPC AICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKSQ
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3627
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnJ family [H]
Homologues:
Organism=Escherichia coli, GI1790536, Length=281, Percent_Identity=99.644128113879, Blast_Score=585, Evalue=1e-168,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010306 [H]
Pfam domain/function: PF06007 PhnJ [H]
EC number: NA
Molecular weight: Translated: 31818; Mature: 31687
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEEEHH GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQI CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE IIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR EEEECCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHEEEEEEEECCE YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP EEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCCCHHCCCCC CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKSQ HHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCC >Mature Secondary Structure ANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI CCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEEEHH GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQI CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE IIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR EEEECCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHEEEEEEEECCE YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP EEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCCCHHCCCCC CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKSQ HHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]