| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209399867
Identifier: 209399867
GI number: 209399867
Start: 1353550
End: 1354692
Strand: Reverse
Name: 209399867
Synonym: ECH74115_1348
Alternate gene names: NA
Gene position: 1354692-1353550 (Counterclockwise)
Preceding gene: 209399591
Following gene: 209397954
Centisome position: 24.31
GC content: 54.42
Gene sequence:
>1143_bases ATGTCTGATATCCTCGAAGATATGATTTATCGCCGTACCCTCTCATGCGGTACGATTCAGGTAACCCGTGACCAGGGTGA AGTTTCGCTCGATGACCTGTTTGACATCGCTGAAAGACGTAACCCGAAACGCGCCTTTCTGTTTGTCAGCAAAGTACTCG GCAGGCACATTCCCGTGCCACCCTCAGTCATGCGGCAGGCCTACAGACAGCTTGCCAGCCAGTTCCCCTCGACACTGACA GGACCCGTACTGTTTATCGGTATGGCTGAAACCGCCGTTGGGCTTGGGGCCGGTGTATTTGATGAAGTGCGCCACCAGCA TCGTGAATCTGTCTATCTGACCTCTACCCGTCACCCGGTTGATGGCACGTTGCTTTGCGAGTTCAAGGAAGAACACAGCC ACGCCACCGATCATCTGATCTATCTGCCAGATGATGAAGAGAAAAGACGTCGTGTTACCAACGCACGAACGCTGGTTTTG ATTGATGACGAGGCAACCACCGGTAATACCTTTATTAACCTGCTTTCTGCCCTGCGTAATACCGGCAAGCTTCAACATAT TGAACAGGTTATCGCCGTAACGCTGACCGACTGGAGTGGCAATGCCCTGTCGGAGCGCACCCCCTTGCCCGTCACTTCGG TTTCGCTTGTAAGCGGTCAGTGGGGATGGACCCCATTACCTGATGCACCTGTCCCGGACATGCCGAAAGTCAACGTAACT TCACGAGGAGAATGGGACATCCAGGGGAAACAGTCATGGGGCCGACTGGGGATGCTCGCACCTGCGGCCGATCTCGGCCA TGAGGTCTCCGTCCACAAGGGGGAACGTATTCTGGTTCTCGGGACCGGGGAATTCGTCTGGGAGCCGTTCCTGCTTGCTG AACGGCTCGAAGCTGCCGGAGCACAGGCATTTTATGGATCGACCACCCGCTCCCCTGTCGCCGTTGGTTATGCCATTGAG TCCGCCATTTCCTTTACGGATAACTACGGGCTGGGCATCCCCAATTTTGTCTATAACGTCGCCCACCAGCAGTTTGACCG CATTCTTGTGTGTACTGAGACACCCGCAGAAAGTATTGACACGCAGCTTCTTAAAGCGCTGGCTGAGGTTGCGCCCGTCG TGGAGATTGTTACCTATGAATAA
Upstream 100 bases:
>100_bases GAGCGCTAAAAACACCTTTTCTCCGGTTGCGGTGAGATCCATTACGGATGTAATTGCATACCCGGAATCACTCTCTAACC TTCTGAATTAAGGCGTATTT
Downstream 100 bases:
>100_bases ACCCGTTGTTCTGAGCGACCTTGACGACACGCTCTTTCAGACCCGTCGTAAAATGGTGGACGAGCTGGCCCTGGAGCCAT TCCGTACCGGTGCCGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSDILEDMIYRRTLSCGTIQVTRDQGEVSLDDLFDIAERRNPKRAFLFVSKVLGRHIPVPPSVMRQAYRQLASQFPSTLT GPVLFIGMAETAVGLGAGVFDEVRHQHRESVYLTSTRHPVDGTLLCEFKEEHSHATDHLIYLPDDEEKRRRVTNARTLVL IDDEATTGNTFINLLSALRNTGKLQHIEQVIAVTLTDWSGNALSERTPLPVTSVSLVSGQWGWTPLPDAPVPDMPKVNVT SRGEWDIQGKQSWGRLGMLAPAADLGHEVSVHKGERILVLGTGEFVWEPFLLAERLEAAGAQAFYGSTTRSPVAVGYAIE SAISFTDNYGLGIPNFVYNVAHQQFDRILVCTETPAESIDTQLLKALAEVAPVVEIVTYE
Sequences:
>Translated_380_residues MSDILEDMIYRRTLSCGTIQVTRDQGEVSLDDLFDIAERRNPKRAFLFVSKVLGRHIPVPPSVMRQAYRQLASQFPSTLT GPVLFIGMAETAVGLGAGVFDEVRHQHRESVYLTSTRHPVDGTLLCEFKEEHSHATDHLIYLPDDEEKRRRVTNARTLVL IDDEATTGNTFINLLSALRNTGKLQHIEQVIAVTLTDWSGNALSERTPLPVTSVSLVSGQWGWTPLPDAPVPDMPKVNVT SRGEWDIQGKQSWGRLGMLAPAADLGHEVSVHKGERILVLGTGEFVWEPFLLAERLEAAGAQAFYGSTTRSPVAVGYAIE SAISFTDNYGLGIPNFVYNVAHQQFDRILVCTETPAESIDTQLLKALAEVAPVVEIVTYE >Mature_379_residues SDILEDMIYRRTLSCGTIQVTRDQGEVSLDDLFDIAERRNPKRAFLFVSKVLGRHIPVPPSVMRQAYRQLASQFPSTLTG PVLFIGMAETAVGLGAGVFDEVRHQHRESVYLTSTRHPVDGTLLCEFKEEHSHATDHLIYLPDDEEKRRRVTNARTLVLI DDEATTGNTFINLLSALRNTGKLQHIEQVIAVTLTDWSGNALSERTPLPVTSVSLVSGQWGWTPLPDAPVPDMPKVNVTS RGEWDIQGKQSWGRLGMLAPAADLGHEVSVHKGERILVLGTGEFVWEPFLLAERLEAAGAQAFYGSTTRSPVAVGYAIES AISFTDNYGLGIPNFVYNVAHQQFDRILVCTETPAESIDTQLLKALAEVAPVVEIVTYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42006; Mature: 41875
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDILEDMIYRRTLSCGTIQVTRDQGEVSLDDLFDIAERRNPKRAFLFVSKVLGRHIPVP CHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC PSVMRQAYRQLASQFPSTLTGPVLFIGMAETAVGLGAGVFDEVRHQHRESVYLTSTRHPV HHHHHHHHHHHHHHCCCHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCC DGTLLCEFKEEHSHATDHLIYLPDDEEKRRRVTNARTLVLIDDEATTGNTFINLLSALRN CCEEEEEECHHCCCCCCEEEECCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHC TGKLQHIEQVIAVTLTDWSGNALSERTPLPVTSVSLVSGQWGWTPLPDAPVPDMPKVNVT CCHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC SRGEWDIQGKQSWGRLGMLAPAADLGHEVSVHKGERILVLGTGEFVWEPFLLAERLEAAG CCCCEEECCCCCCCCCCEECCHHHCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHCC AQAFYGSTTRSPVAVGYAIESAISFTDNYGLGIPNFVYNVAHQQFDRILVCTETPAESID CCEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHH TQLLKALAEVAPVVEIVTYE HHHHHHHHHHHHHHEEEECC >Mature Secondary Structure SDILEDMIYRRTLSCGTIQVTRDQGEVSLDDLFDIAERRNPKRAFLFVSKVLGRHIPVP HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC PSVMRQAYRQLASQFPSTLTGPVLFIGMAETAVGLGAGVFDEVRHQHRESVYLTSTRHPV HHHHHHHHHHHHHHCCCHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCC DGTLLCEFKEEHSHATDHLIYLPDDEEKRRRVTNARTLVLIDDEATTGNTFINLLSALRN CCEEEEEECHHCCCCCCEEEECCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHC TGKLQHIEQVIAVTLTDWSGNALSERTPLPVTSVSLVSGQWGWTPLPDAPVPDMPKVNVT CCHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC SRGEWDIQGKQSWGRLGMLAPAADLGHEVSVHKGERILVLGTGEFVWEPFLLAERLEAAG CCCCEEECCCCCCCCCCEECCHHHCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHCC AQAFYGSTTRSPVAVGYAIESAISFTDNYGLGIPNFVYNVAHQQFDRILVCTETPAESID CCEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHH TQLLKALAEVAPVVEIVTYE HHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA