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The map label for this gene is ygaP [H]

Identifier: 209399848

GI number: 209399848

Start: 3623943

End: 3624461

Strand: Direct

Name: ygaP [H]

Synonym: ECH74115_3910

Alternate gene names: 209399848

Gene position: 3623943-3624461 (Clockwise)

Preceding gene: 209397295

Following gene: 209399639

Centisome position: 65.04

GC content: 46.05

Gene sequence:

>519_bases
ATGGCTTTGACAACCATTTCGCCGCATGATGCACAAGAATTAATCGCACGCGGCGCAAAGTTAATCGATATTCGTGACGC
TGATGAATATCTTCGTGAACATATTCCTGAAGCAGATCTGGCTCCATTATCCGTGCTGGAACAGTCAGGTCTCCCGGCTA
AATTACGTCGCGATCAAATTATATTCCACTGCCAGGCAGGTAAACGCACCAGTAATAACGCCGATAAATTAGCAGCGATT
GCCGCCCCCGCAGAAATCTTTTTACTCGAAGATGGGATTGATGGCTGGAAAAAAGCAGGATTACCAGTAGCGGTAAATAA
ATCTCAACCCTTGCCGTTAATGCGCCAGGTGCAGATCGCTGCGGGTGGTTTAATATTAATCGGCGTTATACTGGGTTATA
CCGTAAATAGCGGTTTCTTCTTATTAAGCGGCTTTGTTGGTGCCGGGTTACTGTTTGCAGGAATTAGCGGTTTTTGTGGG
ATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAATGA

Upstream 100 bases:

>100_bases
CCAACGGGATGCCCAACGCATTCTATATTCCATTAAAAATGAGGCGGTAAATGCCATTATCGCCACCCTGAAAAATGTCT
ATTGTCCGTAAGGAGTCACT

Downstream 100 bases:

>100_bases
GCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTA
CCTTCTGCCAGCGCCTGAGC

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRRDQIIFHCQAGKRTSNNADKLAAI
AAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIAAGGLILIGVILGYTVNSGFFLLSGFVGAGLLFAGISGFCG
MARLLDKMPWNQ

Sequences:

>Translated_172_residues
MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRRDQIIFHCQAGKRTSNNADKLAAI
AAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIAAGGLILIGVILGYTVNSGFFLLSGFVGAGLLFAGISGFCG
MARLLDKMPWNQ
>Mature_171_residues
ALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRRDQIIFHCQAGKRTSNNADKLAAIA
APAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIAAGGLILIGVILGYTVNSGFFLLSGFVGAGLLFAGISGFCGM
ARLLDKMPWNQ

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 slr1261 [H]

Homologues:

Organism=Escherichia coli, GI1789022, Length=172, Percent_Identity=98.2558139534884, Blast_Score=343, Evalue=3e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 18431; Mature: 18300

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRRDQI
CCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHCCCEE
IFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIA
EEEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCHHHHCCCCEEECCCCCCCHHHHHHHH
AGGLILIGVILGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRRDQI
CCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHCCCEE
IFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIA
EEEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCHHHHCCCCEEECCCCCCCHHHHHHHH
AGGLILIGVILGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1480493 [H]