| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yciQ [H]
Identifier: 209399841
GI number: 209399841
Start: 1792780
End: 1794363
Strand: Direct
Name: yciQ [H]
Synonym: ECH74115_1900
Alternate gene names: 209399841
Gene position: 1792780-1794363 (Clockwise)
Preceding gene: 209400954
Following gene: 209396722
Centisome position: 32.17
GC content: 46.91
Gene sequence:
>1584_bases ATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGTTGGGCTTTTTTTCTCTTCGTTAAGTTATGCGAAAAACACGGA GATGCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCGGATGGGGTGCTCGACATCAAAG AAAATATTCATTTTCAGGCGCGAAATCAGCAGATTAAGCACGGATTTTATCGTGATTTACCACGACTATGGATGCAGCCT GATGGGGACGCTGCACTGCTGAACTATCATATTGTTGGCGTCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTG GCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATT ATCAGGTTAAAAATGCTTTCCTGCGTGAGGGAGATTCAGATCTGTTAATCTGGAACGTGACTGGTAACCACTGGCCGTTT GAAATCTATAAGACCCGATTTTCACTCAAGTTCCCTGATATCGCGGGTAATCCATTTAGCGAAATCGATCTCTTTACTGG AGAAGAGGGCGACACATATCGAAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCAGCGATCCGTTTTATCGTGAAG ATTTCACGGTACTCTACCGTTGGCCTCACTCGTTACTTAGCAATGCCCCGGCTCCACAAACGACGAATATTTTCAGCCAT CTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTATTCCTGGTTTGTGGATGGTTATATCTCTGGAA GCGCAGGCCGCAATTTACGTCGGTAGATGTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACC GGCCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACCTGAGTCCTGTAGGCTGG GCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGCTTCTTCCTTTTTTATTTTGTTCCCTTGAGCTTTT GTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCGCTGATTTGTTCAGGCGTGG CCTTTTATTCTCTCTATATCAATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGGTTATTTTAGCGCTGTTTTC CTGACCGGTTATCTCACTGGCATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGGCAGCAACGTTATGCCCACGG TGAAGCTATCGTTAACTATCTCGCGCGTAAAGAGGCAGCAACACACAGTGGGCGTCGGCGGAAAGGGGAAACACGGAAAC TGGATTACGCGTTGCTAGGTTGGGCTGTCTCAGCAAACCTTGGAAGAGAATGGGTAGCACGTATCACCCCATCACTCACA GCGGCTGTTCGCGCCCCGGAAATTGCCCGTAGTGGCGTTTTGTTCTCATTACAGATGCACCTGAGTCTGGGGGCCAATAC CAGTTTATTGGGGCGAAGTTATTCCGGTGGTGCTGCGGGTGGCGGAGGCGGTGGTGGCTGGTAA
Upstream 100 bases:
>100_bases GGTTATTGATCTTACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTG CGTTCCACGGATGGAAGACT
Downstream 100 bases:
>100_bases TTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCAGTTAAAA CGTCGAGTCGTTTACTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MAGKFRCILLLIVGLFFSSLSYAKNTEMPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESSDPFYREDFTVLYRWPHSLLSNAPAPQTTNIFSH LLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTSVDVLRMQKFYLPRKKSSFYRPDTFLQWGGLAILAVILYGNLSPVGW AGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVF LTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAVSANLGREWVARITPSLT AAVRAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGAAGGGGGGGW
Sequences:
>Translated_527_residues MAGKFRCILLLIVGLFFSSLSYAKNTEMPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESSDPFYREDFTVLYRWPHSLLSNAPAPQTTNIFSH LLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTSVDVLRMQKFYLPRKKSSFYRPDTFLQWGGLAILAVILYGNLSPVGW AGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVF LTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAVSANLGREWVARITPSLT AAVRAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGAAGGGGGGGW >Mature_526_residues AGKFRCILLLIVGLFFSSLSYAKNTEMPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPD GDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFE IYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESSDPFYREDFTVLYRWPHSLLSNAPAPQTTNIFSHL LLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTSVDVLRMQKFYLPRKKSSFYRPDTFLQWGGLAILAVILYGNLSPVGWA GMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVFL TGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAVSANLGREWVARITPSLTA AVRAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGAAGGGGGGGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=279, Percent_Identity=95.3405017921147, Blast_Score=539, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 59843; Mature: 59711
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKFRCILLLIVGLFFSSLSYAKNTEMPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLKFPDIAGNPFS HCCCCCCEEEEEEEEEHHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCC EIDLFTGEEGDTYRNGRILEDGRIESSDPFYREDFTVLYRWPHSLLSNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHHH LLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTSVDVLRMQKFYLPRKKSSFYRPDTFLQ HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHH WGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRV HCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHH IITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTG HHHHHHHHHHHHHHHHHEEEECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHH QQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAVSANLGREWVARITPSLT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHCCCCCHHHHHHHCCHHH AAVRAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGAAGGGGGGGW HHHCCCHHHHCCEEEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGKFRCILLLIVGLFFSSLSYAKNTEMPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLKFPDIAGNPFS HCCCCCCEEEEEEEEEHHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCC EIDLFTGEEGDTYRNGRILEDGRIESSDPFYREDFTVLYRWPHSLLSNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHHH LLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTSVDVLRMQKFYLPRKKSSFYRPDTFLQ HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHH WGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRV HCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHH IITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTG HHHHHHHHHHHHHHHHHEEEECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHH QQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAVSANLGREWVARITPSLT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHCCCCCHHHHHHHCCHHH AAVRAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGAAGGGGGGGW HHHCCCHHHHCCEEEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]