| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yfjX [H]
Identifier: 209399757
GI number: 209399757
Start: 2655914
End: 2656393
Strand: Direct
Name: yfjX [H]
Synonym: ECH74115_2854
Alternate gene names: 209399757
Gene position: 2655914-2656393 (Clockwise)
Preceding gene: 209399203
Following gene: 209397679
Centisome position: 47.66
GC content: 53.96
Gene sequence:
>480_bases ATGAAAACCGTTTCTCAGAATACCCCCACAATTTATTCAGCTACAACACCAGAGAATAATCCGCCTCAGTTGGTTGCCAG CCTCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTCACCCTGGAGCCCC GTGTCTTCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAACGGCGGG GCATTTATGGCCCCCGAACCGGATGATGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCGCGCTGA AATGAGCCCGGAAGCCGCCGGTATTGCCGCCTGTCTGATGACGTACAGCCATCATGCCTGTCGTACGGAGAATTATGCCA TGACGGTCCATTATTACCGGTTGCGGGATTACGCCCTGCAGCATCCGGAAGGCAGCTCCATTATGCGCATCATTGACTGA
Upstream 100 bases:
>100_bases GCTGGAGAGCCTGCGCTGATGCCGTTTCCCTGAGTGAGGGAATCATTCAGCTTTCGTTCCCGAAAAACACACATTTATTT GTTATTTAAGGAGTTATCTC
Downstream 100 bases:
>100_bases AAGGGGCCGGAATAATGCAACAGATTTCCTTTCTGCCCGGAGAAATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCC CTGAAAACCCTGGACCGCCA
Product: antirestriction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKTVSQNTPTIYSATTPENNPPQLVASLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGG AFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPEGSSIMRIID
Sequences:
>Translated_159_residues MKTVSQNTPTIYSATTPENNPPQLVASLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGG AFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPEGSSIMRIID >Mature_159_residues MKTVSQNTPTIYSATTPENNPPQLVASLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGG AFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPEGSSIMRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1788996, Length=153, Percent_Identity=67.3202614379085, Blast_Score=220, Evalue=4e-59, Organism=Escherichia coli, GI1786442, Length=145, Percent_Identity=68.2758620689655, Blast_Score=215, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 18124; Mature: 18124
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVSQNTPTIYSATTPENNPPQLVASLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMD CCCCCCCCCEEEEECCCCCCCHHHHHHHCCCHHHHEECHHHCCCCCCEEEECCHHHHHHH RLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLM HHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH TYSHHACRTENYAMTVHYYRLRDYALQHPEGSSIMRIID HHHCCCCCCCCEEEEEEEEEEEHHHHCCCCCCCEEEEEC >Mature Secondary Structure MKTVSQNTPTIYSATTPENNPPQLVASLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMD CCCCCCCCCEEEEECCCCCCCHHHHHHHCCCHHHHEECHHHCCCCCCEEEECCHHHHHHH RLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLM HHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH TYSHHACRTENYAMTVHYYRLRDYALQHPEGSSIMRIID HHHCCCCCCCCEEEEEEEEEEEHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]