| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yidJ [C]
Identifier: 209399668
GI number: 209399668
Start: 1030272
End: 1031753
Strand: Direct
Name: yidJ [C]
Synonym: ECH74115_1018
Alternate gene names: 209399668
Gene position: 1030272-1031753 (Clockwise)
Preceding gene: 209398665
Following gene: 209397748
Centisome position: 18.49
GC content: 52.43
Gene sequence:
>1482_bases ATGAGAGCGATTATTCTGCTGTTCGATAGTCTGAATAAACGTTATCTGCCACCTTATGGCGATGCGTTAACCAAAGCGCC TAATTTCCAACGTCTGGCGGCTCATGCCGCCACCTTTGAAAACAGTTACGTCGGCAGTATGCCGTGTATGCCTGCCCGGC GGGAGTTGCATACCGGGCGATGTAACTTCCTGCATCGGGAGTGGGGGCCGTTAGAACCGTTTGACGATTCCATGCCGGAG CTGCTTAAAAAGGCGGGGATCTATACCCACCTGATAAGCGATCATTTGCATTACTGGGAAGATGGCGGCGGGAATTATCA TAATCGCTACAGTTCGTGGGAGATTGTGCGCGGACAGGAAGGCGATCACTGGCATGCAAGCGTTGCGCAACCGCCTATTC CCGAGGTGCTACGGGTGCCGCAAAAGCAGACCGGTGGCGGTGTTTCTGGTCTGTGGCGCCATGACTGGGCAAACCGGGAA TATATTCAGCAGGAAGCGGATTTTCCACAAACTAAAGTGTTTGATGCAGGCTGTGCCTTTATCCACAAAAATCACGCGGA AGATAACTGGTTATTGCAGATCGAAACGTTTGATCCGCACGAGCCGTTTCACACAACGGAAGAGTATCTTTCCTTGTATG AAGATAACTGGGATGGACCGCATTATGACTGGCCGCGTGGCCGGGTGCAGGAAAGCGACGAGGCCGTGGAGCACATCCGT TGCCGGTATCGTTCGCTGGTGTCGATGTGCGATCGCAACCTGGGGCGCATTCTCGACCTGATGGATGAGCACGATCTGTG GCGAGATACCATGCTGATTGTCGGCACTGACCACGGCTTTTTACTCGGTGAGCATGGCTGGTGGGCGAAAAACCAGATGC CTTATTACAACGAAGTTGCCAATAATCCGTTGTTTATCTGGAACCCGCGCAGTGGTGTAAAAGGAGAGCGGCGACAGGCA CTGGTACAAATGATCGACTGGGCGCCAACGTTGTATGACTTTTTTCAACAGCCAGTGCCGCCCGATGTGCAGGGGCAACC GCTGGCGAAAACGGTCAGTCACGATGAACCAGTACGCAGCTCGGCGATGTTTGGTGTTTTCAGTGGTCATGCTAACGTAA CTGATGGGCGTTATGTGTATATGCGTGCAGCGCTGCCGGGGCGTGAGGATGATATTGCCAACTACACGTTGATGTCCTGC AAAATGAACAGCCGCTATCCGGTGGATGAGATGCGGGCTTTATCGCTGGCCCCACCGTTTCGTTTTACCAAAGGGTTACA GGTATTACGCATCCCGGCACAGGAAAAATATAAGGGGTTGAATCAGTTTGGTCATTTGCTGTTTGATCTGCAAAACGATC CGCAGCAGCTACATCCGATTCATGATGATGTGATCGAGTCCCGGATGATCGCGTTGCTGATTCAGTTGATGAAAGATAAT GATGCGCCGCCAGAGCAGTTTCAGCGCCTGGGATTAGCGTAG
Upstream 100 bases:
>100_bases CGATAGAGAATATTATGGACGGTGAAACTATTGGTCAGCAAATTTATGAAGTGGTTCAGCAACATTTTCCGCATTTAATT AATCAATAAGGTAGGGCGTA
Downstream 100 bases:
>100_bases AGAAGTGATTTTGCCGGAGTGGGTGTTCGCCCACTCCGGCAAATGAATAATTATTGCGGGAACCACTGATCGCTGATTTG TTGATATGTACCGTCAGCTT
Product: sulfatase
Products: NA
Alternate protein names: Cys-type sulfatase [H]
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MRAIILLFDSLNKRYLPPYGDALTKAPNFQRLAAHAATFENSYVGSMPCMPARRELHTGRCNFLHREWGPLEPFDDSMPE LLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWEIVRGQEGDHWHASVAQPPIPEVLRVPQKQTGGGVSGLWRHDWANRE YIQQEADFPQTKVFDAGCAFIHKNHAEDNWLLQIETFDPHEPFHTTEEYLSLYEDNWDGPHYDWPRGRVQESDEAVEHIR CRYRSLVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVANNPLFIWNPRSGVKGERRQA LVQMIDWAPTLYDFFQQPVPPDVQGQPLAKTVSHDEPVRSSAMFGVFSGHANVTDGRYVYMRAALPGREDDIANYTLMSC KMNSRYPVDEMRALSLAPPFRFTKGLQVLRIPAQEKYKGLNQFGHLLFDLQNDPQQLHPIHDDVIESRMIALLIQLMKDN DAPPEQFQRLGLA
Sequences:
>Translated_493_residues MRAIILLFDSLNKRYLPPYGDALTKAPNFQRLAAHAATFENSYVGSMPCMPARRELHTGRCNFLHREWGPLEPFDDSMPE LLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWEIVRGQEGDHWHASVAQPPIPEVLRVPQKQTGGGVSGLWRHDWANRE YIQQEADFPQTKVFDAGCAFIHKNHAEDNWLLQIETFDPHEPFHTTEEYLSLYEDNWDGPHYDWPRGRVQESDEAVEHIR CRYRSLVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVANNPLFIWNPRSGVKGERRQA LVQMIDWAPTLYDFFQQPVPPDVQGQPLAKTVSHDEPVRSSAMFGVFSGHANVTDGRYVYMRAALPGREDDIANYTLMSC KMNSRYPVDEMRALSLAPPFRFTKGLQVLRIPAQEKYKGLNQFGHLLFDLQNDPQQLHPIHDDVIESRMIALLIQLMKDN DAPPEQFQRLGLA >Mature_493_residues MRAIILLFDSLNKRYLPPYGDALTKAPNFQRLAAHAATFENSYVGSMPCMPARRELHTGRCNFLHREWGPLEPFDDSMPE LLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWEIVRGQEGDHWHASVAQPPIPEVLRVPQKQTGGGVSGLWRHDWANRE YIQQEADFPQTKVFDAGCAFIHKNHAEDNWLLQIETFDPHEPFHTTEEYLSLYEDNWDGPHYDWPRGRVQESDEAVEHIR CRYRSLVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVANNPLFIWNPRSGVKGERRQA LVQMIDWAPTLYDFFQQPVPPDVQGQPLAKTVSHDEPVRSSAMFGVFSGHANVTDGRYVYMRAALPGREDDIANYTLMSC KMNSRYPVDEMRALSLAPPFRFTKGLQVLRIPAQEKYKGLNQFGHLLFDLQNDPQQLHPIHDDVIESRMIALLIQLMKDN DAPPEQFQRLGLA
Specific function: Has sulfatase activity toward para-nitrophenyl sulfate, which is increased in presence of calcium ion [H]
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 57046; Mature: 57046
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIILLFDSLNKRYLPPYGDALTKAPNFQRLAAHAATFENSYVGSMPCMPARRELHTGR CCEEEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC CNFLHREWGPLEPFDDSMPELLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWEIVRGQE CCEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC GDHWHASVAQPPIPEVLRVPQKQTGGGVSGLWRHDWANREYIQQEADFPQTKVFDAGCAF CCCEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCEEECCCHHH IHKNHAEDNWLLQIETFDPHEPFHTTEEYLSLYEDNWDGPHYDWPRGRVQESDEAVEHIR HCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH CRYRSLVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHC NNPLFIWNPRSGVKGERRQALVQMIDWAPTLYDFFQQPVPPDVQGQPLAKTVSHDEPVRS CCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHH SAMFGVFSGHANVTDGRYVYMRAALPGREDDIANYTLMSCKMNSRYPVDEMRALSLAPPF HHHEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCH RFTKGLQVLRIPAQEKYKGLNQFGHLLFDLQNDPQQLHPIHDDVIESRMIALLIQLMKDN HHHCCCEEEECCCHHHHHHHHHHHHEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCC DAPPEQFQRLGLA CCCHHHHHHCCCC >Mature Secondary Structure MRAIILLFDSLNKRYLPPYGDALTKAPNFQRLAAHAATFENSYVGSMPCMPARRELHTGR CCEEEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC CNFLHREWGPLEPFDDSMPELLKKAGIYTHLISDHLHYWEDGGGNYHNRYSSWEIVRGQE CCEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC GDHWHASVAQPPIPEVLRVPQKQTGGGVSGLWRHDWANREYIQQEADFPQTKVFDAGCAF CCCEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCEEECCCHHH IHKNHAEDNWLLQIETFDPHEPFHTTEEYLSLYEDNWDGPHYDWPRGRVQESDEAVEHIR HCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH CRYRSLVSMCDRNLGRILDLMDEHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHC NNPLFIWNPRSGVKGERRQALVQMIDWAPTLYDFFQQPVPPDVQGQPLAKTVSHDEPVRS CCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHH SAMFGVFSGHANVTDGRYVYMRAALPGREDDIANYTLMSCKMNSRYPVDEMRALSLAPPF HHHEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCH RFTKGLQVLRIPAQEKYKGLNQFGHLLFDLQNDPQQLHPIHDDVIESRMIALLIQLMKDN HHHCCCEEEECCCHHHHHHHHHHHHEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCC DAPPEQFQRLGLA CCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA