| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is argC
Identifier: 209399663
GI number: 209399663
Start: 5064751
End: 5065755
Strand: Direct
Name: argC
Synonym: ECH74115_5418
Alternate gene names: 209399663
Gene position: 5064751-5065755 (Clockwise)
Preceding gene: 209396067
Following gene: 209398952
Centisome position: 90.9
GC content: 53.53
Gene sequence:
>1005_bases ATGTTGAATACGCTGATTGTGGGTGCCAGCGGCTACGCTGGCGCAGAGCTAGTGACCTGTGTAAATCGCCATCCGCATAT GAACATAACCGCTTTGACTGTTTCAGCGCAAAGCAATGATGCGGGAAAGTTAATCTCCGATTTGCATCCGCAGCTAAAAG GCATCGTTGATCTGCCGTTGCAGCCGATGTCGGATATCAGCGAGTTTAGCCCTGGGGTGGACGTGGTGTTTCTCGCCACC GCCCATGAAGTTAGCCACGATTTAGCGCCGCAGTTTCTTGACGCGGGCTGCGTGGTGTTCGACCTTTCCGGCGCGTTTCG TGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGCTGGAACAGGCAGCCTACG GTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCAGGCTGTTATCCGACGGCAGCACAG TTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAG CGGTGCAGGACGTAAGGCAGCGATTTCAAATAGTTTTTGTGAAGTTAGCCTGCAACCGTATGGCGTCTTTACCCATCGCC ATCAACCAGAGATCGCCACACACCTCGGTGCTGACGTTATCTTCACCCCGCATCTGGGCAATTTCCCGCGCGGCATTCTC GAAACCATTACCTGCCGCCTGAAACCGGGTGTGACCCAGGCGCAAGTGGCGCAAGCGTTACAGCAGGCGTATGCCCATAA ACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTACCATTTTGCGATATCGGGTTTG CCGTTCAGGGCGAACATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGC GCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAA
Upstream 100 bases:
>100_bases TAAAAATACACTAACGTTGAGCGTAATAAAACCCACCAGCCGTAAGGTGAATGTTTTACGTTTAACCTGGCAACCAGACA TAAGAAGGTGAATAGCCCCG
Downstream 100 bases:
>100_bases GGGTGCAATGATGAATCCATTAATTATCAAACTGGGTGGCGTACTGCTGGATAGTGAAGAGGCGCTGGAACGTCTGTTTA GCGCACTGGTGAATTATCGT
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLNTLIVGASGYAGAELVTCVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDISEFSPGVDVVFLAT AHEVSHDLAPQFLDAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ LALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGIL ETITCRLKPGVTQAQVAQALQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQC ANIRFGYAETQSLI
Sequences:
>Translated_334_residues MLNTLIVGASGYAGAELVTCVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDISEFSPGVDVVFLAT AHEVSHDLAPQFLDAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ LALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGIL ETITCRLKPGVTQAQVAQALQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQC ANIRFGYAETQSLI >Mature_334_residues MLNTLIVGASGYAGAELVTCVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDISEFSPGVDVVFLAT AHEVSHDLAPQFLDAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ LALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGIL ETITCRLKPGVTQAQVAQALQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQC ANIRFGYAETQSLI
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=334, Percent_Identity=98.8023952095808, Blast_Score=677, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320913, Length=332, Percent_Identity=29.2168674698795, Blast_Score=114, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_ECO57 (Q8X732)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: D86087 - PIR: G91239 - RefSeq: NP_290595.1 - RefSeq: NP_312914.1 - ProteinModelPortal: Q8X732 - SMR: Q8X732 - EnsemblBacteria: EBESCT00000024805 - EnsemblBacteria: EBESCT00000056216 - GeneID: 914990 - GeneID: 960174 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z5516 - KEGG: ecs:ECs4887 - GeneTree: EBGT00050000009043 - HOGENOM: HBG294213 - OMA: VCRIAVH - ProtClustDB: PRK00436 - BioCyc: ECOL83334:ECS4887-MONOMER - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.38
Molecular weight: Translated: 35860; Mature: 35860
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS01224 ARGC; PS00142 ZINC_PROTEASE
Important sites: ACT_SITE 154-154
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTLIVGASGYAGAELVTCVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPL CCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCHHHHCCCCCCC QPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLDAGCVVFDLSGAFRVNDATFYEKYYGF CCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCEEECCHHHHHHHCCC THQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVI CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCEE NATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGIL ECCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHCCCCEEECCCCCCCCHHHH ETITCRLKPGVTQAQVAQALQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHL HHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCEECCCEEECCCEE IIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI EEEECCCCHHHHHHHHHEEHHCEEECCHHHHCCC >Mature Secondary Structure MLNTLIVGASGYAGAELVTCVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPL CCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCHHHHCCCCCCC QPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLDAGCVVFDLSGAFRVNDATFYEKYYGF CCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCEEECCHHHHHHHCCC THQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVI CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCEE NATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGIL ECCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHCCCCEEECCCCCCCCHHHH ETITCRLKPGVTQAQVAQALQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHL HHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCEECCCEEECCCEE IIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI EEEECCCCHHHHHHHHHEEHHCEEECCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796