Click here to switch to the map view.

The map label for this gene is yfaD [H]

Identifier: 209399653

GI number: 209399653

Start: 3127638

End: 3128564

Strand: Direct

Name: yfaD [H]

Synonym: ECH74115_3382

Alternate gene names: 209399653

Gene position: 3127638-3128564 (Clockwise)

Preceding gene: 209397027

Following gene: 209400431

Centisome position: 56.13

GC content: 48.54

Gene sequence:

>927_bases
ATGACCGAATCAACAACCTCCTCCCCGCATGATGCAGTATTTAAAACCTTTATGTTCACACCCGAAACCGCACGGGATTT
TCTCGAAATACATTTACCAGAACCACTGCGCAAGCTTTGCAACCTGCAAACCTTACGCCTGGAACCCACTAGTTTTATTG
AAAAAAGTTTACGCGCTTACTACTCGGATGTTTTGTGGTCCGTGGAAACCAGCGACGGTGACGGCTATATCTACTGCGTG
ATTGAACATCAAAGCTCTGCAGAAAAGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCT
GGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCCTACCCGTACTCAC
TCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGCCCGGCAGTTGTACACCGAAGCTTTTCCGTTGGTGGATATTACC
ATCGTACCTGACGATGAGATCATGCAACATCGGCGTATAGCTCTGCTTGAACTGATTCAAAAGCATATTCGCGACCGCGA
TTTAATCGGTATGGTCGACAGGATCACCACGCTTTTGGTTAGAGGCTTCACTAATGACAGCCAGCTACAAACACTGTTTA
ATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTCAGGAGATTGCCGAACGTTCACCACTACAAAAG
GAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGTTGGCAGGAAGGTAAATTAGAAGGTTT
GCAGGAAGGCATGCATGAACAAGCTATTAAAATTGCCTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCTGGTGCTCG
CGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAA

Upstream 100 bases:

>100_bases
TTCCTCTGAAAACGTCTCGCAAAGGCTGAAACTGGCAGATGTCAAAGGCCTGGGATAACCGTAATGTCGCGTCATCATAA
ATATCAGGTGACGGACAACC

Downstream 100 bases:

>100_bases
TTAACACAGTCCCACAGCCGATCCCCATGGGCCTTTGATATCAATAACTACCTTTTATGCGTGGCCCATTTTTGCCTGAT
TTAAACATCGCCAGTCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCV
IEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQK
ERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGFDRDLVLAATQLSEADLAANNH

Sequences:

>Translated_308_residues
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCV
IEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQK
ERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGFDRDLVLAATQLSEADLAANNH
>Mature_307_residues
TESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVI
EHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITI
VPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKE
RLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGFDRDLVLAATQLSEADLAANNH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788577, Length=308, Percent_Identity=93.1818181818182, Blast_Score=586, Evalue=1e-169,
Organism=Escherichia coli, GI1788643, Length=308, Percent_Identity=64.2857142857143, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI1789816, Length=307, Percent_Identity=58.957654723127, Blast_Score=376, Evalue=1e-106,
Organism=Escherichia coli, GI1786324, Length=306, Percent_Identity=50, Blast_Score=301, Evalue=4e-83,
Organism=Escherichia coli, GI87082070, Length=65, Percent_Identity=92.3076923076923, Blast_Score=117, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 35744; Mature: 35613

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAY
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCEEECCHHHHHHHHHHHH
YSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPL
HHHHHHEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQ
HHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH
KHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQK
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
ERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGFDRDLVLAATQLSE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ADLAANNH
HHHCCCCC
>Mature Secondary Structure 
TESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAY
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCEEECCHHHHHHHHHHHH
YSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPL
HHHHHHEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQ
HHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH
KHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQK
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
ERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGFDRDLVLAATQLSE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ADLAANNH
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3286606; 7984428 [H]