| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is aprE [H]
Identifier: 209399564
GI number: 209399564
Start: 607251
End: 608426
Strand: Direct
Name: aprE [H]
Synonym: ECH74115_0585
Alternate gene names: 209399564
Gene position: 607251-608426 (Clockwise)
Preceding gene: 209400615
Following gene: 209399114
Centisome position: 10.9
GC content: 56.8
Gene sequence:
>1176_bases ATGAACGGACAACTGCAATATAACCGTGGTCTGACTGAACCCCGCCTGCCGCGTTCGGCGCTGGCGGTACGCGTTACCGC TGTGATGCTGCTCTGTTTTCTCGGCTGGGCGTGGTACTTCCAGCTTGATGAAGTCACCACCGGCAGCGGCACGGTAGAAC CTTCCGGGCGCGAACAGGTGGTGCAGTCGCTGGAAGGCGGAATTCTGTATCATCTCGACGTGAAAGTTGGCGATATTGTC GAACAGGGCCAGCCGCTGGCGCAGCTTAACCGCACCAAAACGGAATCCGACGTCCAGGAAGCGATGTCGCGGCTGTACGC GGCGCTGGCAACCTCGGCGCGGCTGCGGGCGGAAGTGAGCAATAAACCGCTGGTCTTCCCTGACGAACTGAATAAATTCC CCGAACTTATCGAGTCGGAAACGGCGTTGTACAACACTCGCCGCGACGGGTTGAACAAAGCCACCACCGGGCTGACGCAG GGGATTAGCCTGGTCAATCGCGAACTGGCGATGACCCAGCCGCTGGTAAAACAGGGGGCAGCGAGCAGCGTCGAAGTACT GCGCCTGCAACGCCAGGCCAATGAACTGGAAAACAAACTCAGCGACGTGCGCACGCAATACTACGTTCAGGCGCGCGAAG AGTTAGCAAAAGCCAATGCGGAAGTGGAAACCCAGCGTTCGGTGATCCGTGGACGGGAAGACTCTCTCACCAGGCTCAAC TTTACCGCGCCGGTGCGAGGCATTGTTCAGGATATTGATGTCACCACGGTTGGCGGCGTCATCGCCCCCGGTGGTAAACT GATGACCATCGTGCCGCTGGATGAGCAACTGCTGATTGAGGCAAAAATCTCCCCGCGCGATGTGGCGTTTATCCACCCGG GGCAAAAATCGCTGGTGAAAATAACTGCCTACGATTACTCCATCTACGGCGGCCTGCCGGGAGAAGTGGCGGTGATATCA CCAGACACCGTGCAGGATGAAGTGCGGCGCGATGTTTATTACTATCGGGTGTACATTCGCACTTTCAGCAACCATCTGGA AAACAAAAGCAAACAGCAGTTTCCGATATTCCCCGGTATGGTGGCGACGGTCGATATCCGCACCGGCAAAAAAAGCGTGC TGGATTATCTGTTGAAACCCTTTAACAAAGCACAGGAGGCGTTGCGCGAACGATGA
Upstream 100 bases:
>100_bases GGATTGTGATGGACGGCGCGAAAGAGGCCATTTTGCGTGAACAGGGCGAGCCCACAGCGCGACGGGTGGTGTTGCAGGAG AAGAATAAGGGGTCTGCGGC
Downstream 100 bases:
>100_bases ACATTAGCGATGTAGCAAAAATTACCGGCCTGACCAGCAAAGCCATTCGCTTCTATGAAGAGAAGGGGCTGGTGACGCCG CCGATGCGCAGCGAAAATGG
Product: membrane spanning export protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNGQLQYNRGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGILYHLDVKVGDIV EQGQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVSNKPLVFPDELNKFPELIESETALYNTRRDGLNKATTGLTQ GISLVNRELAMTQPLVKQGAASSVEVLRLQRQANELENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLN FTAPVRGIVQDIDVTTVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGEVAVIS PDTVQDEVRRDVYYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDIRTGKKSVLDYLLKPFNKAQEALRER
Sequences:
>Translated_391_residues MNGQLQYNRGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGILYHLDVKVGDIV EQGQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVSNKPLVFPDELNKFPELIESETALYNTRRDGLNKATTGLTQ GISLVNRELAMTQPLVKQGAASSVEVLRLQRQANELENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLN FTAPVRGIVQDIDVTTVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGEVAVIS PDTVQDEVRRDVYYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDIRTGKKSVLDYLLKPFNKAQEALRER >Mature_391_residues MNGQLQYNRGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGILYHLDVKVGDIV EQGQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVSNKPLVFPDELNKFPELIESETALYNTRRDGLNKATTGLTQ GISLVNRELAMTQPLVKQGAASSVEVLRLQRQANELENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLN FTAPVRGIVQDIDVTTVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGEVAVIS PDTVQDEVRRDVYYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDIRTGKKSVLDYLLKPFNKAQEALRER
Specific function: Involved in the secretion of alkaline protease [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 43629; Mature: 43629
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGQLQYNRGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQV CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHH VQSLEGGILYHLDVKVGDIVEQGQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVS HHHHCCCEEEEEECCHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NKPLVFPDELNKFPELIESETALYNTRRDGLNKATTGLTQGISLVNRELAMTQPLVKQGA CCCEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASSVEVLRLQRQANELENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEE FTAPVRGIVQDIDVTTVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVK CCCHHHHHHHHCCEEEECCEECCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCCCEEE ITAYDYSIYGGLPGEVAVISPDTVQDEVRRDVYYYRVYIRTFSNHLENKSKQQFPIFPGM EEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VATVDIRTGKKSVLDYLLKPFNKAQEALRER EEEEEECCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNGQLQYNRGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQV CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHH VQSLEGGILYHLDVKVGDIVEQGQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVS HHHHCCCEEEEEECCHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NKPLVFPDELNKFPELIESETALYNTRRDGLNKATTGLTQGISLVNRELAMTQPLVKQGA CCCEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASSVEVLRLQRQANELENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEE FTAPVRGIVQDIDVTTVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVK CCCHHHHHHHHCCEEEECCEECCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCCCEEE ITAYDYSIYGGLPGEVAVISPDTVQDEVRRDVYYYRVYIRTFSNHLENKSKQQFPIFPGM EEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VATVDIRTGKKSVLDYLLKPFNKAQEALRER EEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1427098; 10984043 [H]