Click here to switch to the map view.

The map label for this gene is ybhJ [H]

Identifier: 209399369

GI number: 209399369

Start: 890737

End: 892998

Strand: Direct

Name: ybhJ [H]

Synonym: ECH74115_0875

Alternate gene names: 209399369

Gene position: 890737-892998 (Clockwise)

Preceding gene: 209397894

Following gene: 209399394

Centisome position: 15.99

GC content: 51.19

Gene sequence:

>2262_bases
ATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAAT
TAAAAAAGAAGAAGCAAAAAAAGGCACTATTGCCTGGTCTATTCTCTCTTCTCATAATACGTCCGGAAATATGGATAAAC
TTAAAATTAAGTTTGATTCATTAGCCTCTCACGATATTACCTTTGTTGGTATTGTACAGACCGCTAAAGCGTCCGGTATG
GAACGTTTCCCGCTGCCGTATGTGCTGACCAACTGCCATAACTCACTCTGCGCCGTCGGCGGCACCATTAACGGTGATGA
CCATGTTTTTGGTTTATCGGCAGCTCAGCGTTATGGCGGTATTTTTGTGCCTCCGCATATTGCGGTCATCCATCAATATA
TGCGTGAGATGATGGCAGGTGGCGGCAAAATGATCCTCGGGTCAGACAGTCACACCCGTTACGGTGCATTAGGGACAATG
GCAGTCGGTGAGGGCGGCGGCGAGTTGGTAAAACAATTGCTTAATGACACCTGGGATATCGACTATCCGGGAGTTGTTGC
GGTGCATCTGACCGGAAAACCAGCGCCGTATGTGGGGCCGCAGGATGTGGCGTTGGCTATCATCGGTGCCGTGTTCAAAA
ACGGCTACGTCAAAAACAAAGTGATGGAATTCGTAGGTCCCGGTGTTGCTGCGCTCTCTACCGATTTCCGTAACAGCGTT
GACGTTATGACCACTGAAACGACCTGTTTAAGTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCA
CGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCG
CCATCAAACCAATGATTGCGCTGCCGTTCCACCCGAGCAACGTGTATGAAATCGACACACTGAACCAGAACTTGACCGAC
ATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGACAAAGTGGAAAA
TGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATG
CACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCGGTTTACCCGTCATCACAGCCGGTGTTTATGGATCTC
GCCAAAAAAGGTGTGGTAGCAGATTTGATTGGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGC
GGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAG
CTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTGGCTATTTAACC
TCTGCCAGCGAACTCGATTGCTGGGACAACGTGCCGGAGTACGCCTTCGATGTAACGCCGTATAAAAATCGCGTCTATCA
AGGCTTTGTGAAAGGGGCGGCCCAGCAACCGCTGATTTACGGACCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGA
CTGACAATATCGTCCTCAAAGTGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAATTGATTCCTTCCGGTGAA
ACCTCTTCTTATCGTTCAAATCCGATTGGTCTGGCGGAGTTTACCCTGTCACGCCGCGATCCAGGTTATGTTGGCAGCAG
TAAAGCGACTGCTGAGCTGGAAAATCAGCGTCTGGCGGGGAATGTCAGCGAGCTGACAGAGGTGTTTGCGCGCATTAAGC
AGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGT
TCTGCGCGTGAACAGGCGGCGAGTTGTCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACG
CTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAGATGGTGGAAGCGCCAACCTTTGAAGTGGGGGATTACA
TTTACATCCCTGGCATTAAAGCGGCGCTGGATAATCCGGGTACGACGTTTAAAGGTTATGTGATCCATGAAGATGCGCCG
GTAACGGAAATTACGCTCTATATGGAAAGTCTGACTGCTGAAGAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTT
CAATAAAAACCGTCAGATGTAA

Upstream 100 bases:

>100_bases
TTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTTTCTTGCTGCGCACTTCACGGTGC
GCAGATATCTGGAGCATTTG

Downstream 100 bases:

>100_bases
AAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTGGCGCATCTTATCCGACCTACAAATC
GCATCGAACCGTAGGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGAAQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAEFTLSRRDPGYVGSSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDG
SAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMVEAPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
VTEITLYMESLTAEEREIIKAGSLINFNKNRQM

Sequences:

>Translated_753_residues
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGAAQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAEFTLSRRDPGYVGSSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDG
SAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMVEAPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
VTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>Mature_753_residues
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGAAQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAEFTLSRRDPGYVGSSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDG
SAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMVEAPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
VTEITLYMESLTAEEREIIKAGSLINFNKNRQM

Specific function: Unknown

COG id: COG1048

COG function: function code C; Aconitase A

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aconitase/IPM isomerase family [H]

Homologues:

Organism=Homo sapiens, GI4501867, Length=748, Percent_Identity=24.5989304812834, Blast_Score=137, Evalue=5e-32,
Organism=Homo sapiens, GI8659555, Length=401, Percent_Identity=23.4413965087282, Blast_Score=68, Evalue=3e-11,
Organism=Escherichia coli, GI87081781, Length=753, Percent_Identity=99.203187250996, Blast_Score=1553, Evalue=0.0,
Organism=Caenorhabditis elegans, GI25149337, Length=745, Percent_Identity=23.758389261745, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI32564738, Length=719, Percent_Identity=23.7830319888734, Blast_Score=111, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI25149342, Length=612, Percent_Identity=23.0392156862745, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17568399, Length=659, Percent_Identity=22.4582701062215, Blast_Score=77, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323335, Length=675, Percent_Identity=24, Blast_Score=136, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6322261, Length=395, Percent_Identity=25.8227848101266, Blast_Score=115, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6320440, Length=405, Percent_Identity=24.9382716049383, Blast_Score=80, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6321429, Length=333, Percent_Identity=24.9249249249249, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI28571643, Length=685, Percent_Identity=24.5255474452555, Blast_Score=118, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281365315, Length=705, Percent_Identity=22.4113475177305, Blast_Score=103, Evalue=5e-22,
Organism=Drosophila melanogaster, GI17864292, Length=705, Percent_Identity=22.4113475177305, Blast_Score=103, Evalue=5e-22,
Organism=Drosophila melanogaster, GI161076999, Length=657, Percent_Identity=22.3744292237443, Blast_Score=99, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015931
- InterPro:   IPR015937
- InterPro:   IPR001030
- InterPro:   IPR015928
- InterPro:   IPR015932
- InterPro:   IPR015935
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00330 Aconitase; PF00694 Aconitase_C [H]

EC number: NA

Molecular weight: Translated: 81360; Mature: 81360

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS
CEEECCCCEEEECCCCEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECC
LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG
CCCCCEEEEEEEEHHHHCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEECHHHHHCCC
IFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI
EECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC
DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIA
EEEEECHHHHHHHHCCHHHHHHEEEECCCCCCCEEECCCCCEEECCEEEEEHHHCCCEEE
LPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC
ECCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCEEEECCEEEEC
SGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHCCHHHHHHH
CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHEECCCCCEEC
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGAAQQPLIYGPNIKDWPELGALTDNIVLK
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHCCHHHHHHHH
VCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGSSKATAELENQRLAG
HHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC
NVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EEYATKRYRSNVINWGMLPLQMVEAPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
HHHHHHHHHHCCCCCCCCHHHHHCCCCEECCCEEEECCCHHHCCCCCCEEEEEEEECCCC
VTEITLYMESLTAEEREIIKAGSLINFNKNRQM
CCCEEHHHHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS
CEEECCCCEEEECCCCEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECC
LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG
CCCCCEEEEEEEEHHHHCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEECHHHHHCCC
IFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI
EECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC
DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIA
EEEEECHHHHHHHHCCHHHHHHEEEECCCCCCCEEECCCCCEEECCEEEEEHHHCCCEEE
LPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC
ECCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCEEEECCEEEEC
SGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHCCHHHHHHH
CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHEECCCCCEEC
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGAAQQPLIYGPNIKDWPELGALTDNIVLK
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHCCHHHHHHHH
VCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGSSKATAELENQRLAG
HHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC
NVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EEYATKRYRSNVINWGMLPLQMVEAPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
HHHHHHHHHHCCCCCCCCHHHHHCCCCEECCCEEEECCCHHHCCCCCCEEEEEEEECCCC
VTEITLYMESLTAEEREIIKAGSLINFNKNRQM
CCCEEHHHHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]