| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209399167
Identifier: 209399167
GI number: 209399167
Start: 4789381
End: 4791789
Strand: Reverse
Name: 209399167
Synonym: ECH74115_5147
Alternate gene names: NA
Gene position: 4791789-4789381 (Counterclockwise)
Preceding gene: 209397340
Following gene: 209399820
Centisome position: 86.0
GC content: 31.26
Gene sequence:
>2409_bases ATGGTCGCTAAATTAAAACCAGATGTTTTTGTTAATACTAATCCTTTTTTAGAAGCAATGTATAAGGAGAGGCTTAGTCA TAAAGGCTATTCTGATAAAATTGCTTTAAGTATTAATGATAAGAAATATAATGTAAACTCTAAGGATATTGAAAATATTC TTGATGGCAAAGGGGATTTATTTAAAAAACGTACACTGTGGGAGTTTGTTCGCGATCTTTTTCCTGGCTCTCATATTAAA GAAGTCAAAGGCTTAATTTACGAATTTGTCACGAAAGTTGATAATAAAGCCGAGGTGTTCGATAAGATTAAATCTCTGGC AAAAAAAGAACAACAATGGCGATTTAGTACTAAGACAGACTTTACCACAAATGAAAATAATGAAGTTATTGTGAGTAGAT CCTTTAATCTCTACACGGGGGCTACTTCGAATGATAACGAAAAAAAACAGGTTTCTTCAGAGAGATTAACGCTTGATAAT TATCTCGATGATTTACATTTTGATAATTCTCCCTTGGTGAGATTAACGTTTGATAATTATTCTGTAAAACTTGCGACGCT GATTAAAAATAAAATTCCTATTATTAATACAACAATCAATTTATCATCGTTGTCTAAGGATGTTTTAAATTCATTAAAAT ATTGTAGTTTTAAGAATGTAATTTTTTCAGGAGTGATAAACAGCCCTAACCTTGAAGGTCCGGTTTTTGAAAATTGCTAT TTCGATGATTGTAAATTCAACAACATACAGCTTTATGAGACTAATGATGATACTGTGGAATCAGGAAATAAAAAACCAAT AAAAGGTATGTTTAAAGGTTGTTTTATTTCTAAATGCAAAATTGAAAATTATAGATGTGAGACGTCTAAAATCTACACCG TTACACAACCTGATAGTATTCAAGAAAAATTAGGTTCTTATCTCTTTATGCAGTCTTTCGTTCAGGATTGTATAATCCAG GGAGGATGTTGTCCTGGCTCGAGTATACTTCTGAGTCATTTTTATAACTGTAATATAATAGGGCTTGATGCTCATGGAAT GGATTTTTTGGCAAATTCGTTCAACAAGTCTAATTATGATGAAATCAGGGGGCCGGATACGGGGACTGTGTTTTATAATT GTAATTTGAAGCATACTAAAATAAACGATGGTCTTCGTGAAGATGGTTCAGATAGAACTATGTTTAACTCCAAAGAGTAT TTTTCTGATTACATTGAAAGAAGATCGAGAAATCTTAAGTTAGATGATAATTTTTCGAAATGCGTAGAGAGTATAAAGAA AGGGACCGATTCTTCATTTAGCAAGAAAAATACAGAGAACAATAATGTCTTCTTTAAAAATAGTAATTTGATTGGGGCAA ATTTAGGCTATTATTACAGTGGAGATAGGTGCAAAGACTGTGCTATTGATCCAAATACAAATTATTCAAAAGATGGTCTT ACAGCGCAAAAATACATGTATATGGATCTGGACGGAGCTATAAGTAAAGAACAAATACCTGATTTCTTAAAAAAGGTAAG TGCTATCAATATCGATGTAATAAATTTTTATAATTCCGAGTCAAAGACTAAGGAAAAATATAAAAACGCATTTTTAGAGT TAGAGTCGTTTTTATCAACACTTTATGTTGAAAATAAATCGTACGAGGAAAAATATCATTTTGATAATAGTAGGGTTGAG TTTTTTATTTTTAAAGATATGCAGGAAAATGCACAAAATATCATTAACAATATGATAGAAAGTGACCGGATTAAGTTTGT TGAATCTATAATAAATAAAATGATTCCGCCGCCAGATGGAACAATACTTACTGAAAATCCAAAAGAATATGTCCAAAAGC AAATAAAGGAGTCTCATAAAGAATCTGCTACAAATGTAACATTTGATTATAAGGAACTTGCACCCATTTTTGAAGGTGTT GAAGAAAAACAAATTAAAGCACTATCAAACCAACTGGAACATATAAAATCGTTTAAGACAGATTACGACTCAAGGCTCAA TAAGTATGCTCGCGATTTTTACTATTTTTCCAGTGCATTTGCAATTAACTGGGAGGATTTACTAAAAAACTATCAGGAAA TAAGAGCTTCCATTAAAGATTACGATGACTTATTGCGAGAAATTAAAGAGTTAATCATAAGTCGTAATAAATCATTAGAG GATAAAAGGACTTTATTTGATAACAAAAGGGACAATTGGAATAGTATAGAAGTGCAGGATGAAGTAAATGCATTGAATGC GAAAATTGTCGATTGTGATGATAAAATACGTTCTAAGCTTACTATTGTTCGAAATAATAGACTTGAGAATCAATATAAAG ACGATAAAAACATCAGTGACGCGATGCGTAATATTCTGGATTGGTTCGAACGGTATCCCGATATTGTACAAAATATAACC CAGGCTTAA
Upstream 100 bases:
>100_bases ATAAGTAACACTTGTTGCTAACCTAACTAGCAGTACAGTTAATTAACAACATAGAAGTTATTGTTTTTCAAACAACTCAA TATTACACGCCGGAGGATTT
Downstream 100 bases:
>100_bases CCATACAGAGGGTGGATGACAGGACGAATAACGACATAAATTATTCATAGGGAATAGACGCTTACTCATCAGACACCTGG TGTTCTGTATCTCAAACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MVAKLKPDVFVNTNPFLEAMYKERLSHKGYSDKIALSINDKKYNVNSKDIENILDGKGDLFKKRTLWEFVRDLFPGSHIK EVKGLIYEFVTKVDNKAEVFDKIKSLAKKEQQWRFSTKTDFTTNENNEVIVSRSFNLYTGATSNDNEKKQVSSERLTLDN YLDDLHFDNSPLVRLTFDNYSVKLATLIKNKIPIINTTINLSSLSKDVLNSLKYCSFKNVIFSGVINSPNLEGPVFENCY FDDCKFNNIQLYETNDDTVESGNKKPIKGMFKGCFISKCKIENYRCETSKIYTVTQPDSIQEKLGSYLFMQSFVQDCIIQ GGCCPGSSILLSHFYNCNIIGLDAHGMDFLANSFNKSNYDEIRGPDTGTVFYNCNLKHTKINDGLREDGSDRTMFNSKEY FSDYIERRSRNLKLDDNFSKCVESIKKGTDSSFSKKNTENNNVFFKNSNLIGANLGYYYSGDRCKDCAIDPNTNYSKDGL TAQKYMYMDLDGAISKEQIPDFLKKVSAINIDVINFYNSESKTKEKYKNAFLELESFLSTLYVENKSYEEKYHFDNSRVE FFIFKDMQENAQNIINNMIESDRIKFVESIINKMIPPPDGTILTENPKEYVQKQIKESHKESATNVTFDYKELAPIFEGV EEKQIKALSNQLEHIKSFKTDYDSRLNKYARDFYYFSSAFAINWEDLLKNYQEIRASIKDYDDLLREIKELIISRNKSLE DKRTLFDNKRDNWNSIEVQDEVNALNAKIVDCDDKIRSKLTIVRNNRLENQYKDDKNISDAMRNILDWFERYPDIVQNIT QA
Sequences:
>Translated_802_residues MVAKLKPDVFVNTNPFLEAMYKERLSHKGYSDKIALSINDKKYNVNSKDIENILDGKGDLFKKRTLWEFVRDLFPGSHIK EVKGLIYEFVTKVDNKAEVFDKIKSLAKKEQQWRFSTKTDFTTNENNEVIVSRSFNLYTGATSNDNEKKQVSSERLTLDN YLDDLHFDNSPLVRLTFDNYSVKLATLIKNKIPIINTTINLSSLSKDVLNSLKYCSFKNVIFSGVINSPNLEGPVFENCY FDDCKFNNIQLYETNDDTVESGNKKPIKGMFKGCFISKCKIENYRCETSKIYTVTQPDSIQEKLGSYLFMQSFVQDCIIQ GGCCPGSSILLSHFYNCNIIGLDAHGMDFLANSFNKSNYDEIRGPDTGTVFYNCNLKHTKINDGLREDGSDRTMFNSKEY FSDYIERRSRNLKLDDNFSKCVESIKKGTDSSFSKKNTENNNVFFKNSNLIGANLGYYYSGDRCKDCAIDPNTNYSKDGL TAQKYMYMDLDGAISKEQIPDFLKKVSAINIDVINFYNSESKTKEKYKNAFLELESFLSTLYVENKSYEEKYHFDNSRVE FFIFKDMQENAQNIINNMIESDRIKFVESIINKMIPPPDGTILTENPKEYVQKQIKESHKESATNVTFDYKELAPIFEGV EEKQIKALSNQLEHIKSFKTDYDSRLNKYARDFYYFSSAFAINWEDLLKNYQEIRASIKDYDDLLREIKELIISRNKSLE DKRTLFDNKRDNWNSIEVQDEVNALNAKIVDCDDKIRSKLTIVRNNRLENQYKDDKNISDAMRNILDWFERYPDIVQNIT QA >Mature_802_residues MVAKLKPDVFVNTNPFLEAMYKERLSHKGYSDKIALSINDKKYNVNSKDIENILDGKGDLFKKRTLWEFVRDLFPGSHIK EVKGLIYEFVTKVDNKAEVFDKIKSLAKKEQQWRFSTKTDFTTNENNEVIVSRSFNLYTGATSNDNEKKQVSSERLTLDN YLDDLHFDNSPLVRLTFDNYSVKLATLIKNKIPIINTTINLSSLSKDVLNSLKYCSFKNVIFSGVINSPNLEGPVFENCY FDDCKFNNIQLYETNDDTVESGNKKPIKGMFKGCFISKCKIENYRCETSKIYTVTQPDSIQEKLGSYLFMQSFVQDCIIQ GGCCPGSSILLSHFYNCNIIGLDAHGMDFLANSFNKSNYDEIRGPDTGTVFYNCNLKHTKINDGLREDGSDRTMFNSKEY FSDYIERRSRNLKLDDNFSKCVESIKKGTDSSFSKKNTENNNVFFKNSNLIGANLGYYYSGDRCKDCAIDPNTNYSKDGL TAQKYMYMDLDGAISKEQIPDFLKKVSAINIDVINFYNSESKTKEKYKNAFLELESFLSTLYVENKSYEEKYHFDNSRVE FFIFKDMQENAQNIINNMIESDRIKFVESIINKMIPPPDGTILTENPKEYVQKQIKESHKESATNVTFDYKELAPIFEGV EEKQIKALSNQLEHIKSFKTDYDSRLNKYARDFYYFSSAFAINWEDLLKNYQEIRASIKDYDDLLREIKELIISRNKSLE DKRTLFDNKRDNWNSIEVQDEVNALNAKIVDCDDKIRSKLTIVRNNRLENQYKDDKNISDAMRNILDWFERYPDIVQNIT QA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93140; Mature: 93140
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAKLKPDVFVNTNPFLEAMYKERLSHKGYSDKIALSINDKKYNVNSKDIENILDGKGDL CCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCHHHHHHHHCCCCHH FKKRTLWEFVRDLFPGSHIKEVKGLIYEFVTKVDNKAEVFDKIKSLAKKEQQWRFSTKTD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC FTTNENNEVIVSRSFNLYTGATSNDNEKKQVSSERLTLDNYLDDLHFDNSPLVRLTFDNY CCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC SVKLATLIKNKIPIINTTINLSSLSKDVLNSLKYCSFKNVIFSGVINSPNLEGPVFENCY CEEEHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FDDCKFNNIQLYETNDDTVESGNKKPIKGMFKGCFISKCKIENYRCETSKIYTVTQPDSI CCCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHEEEECCCEEECCCEEEEECCCHHH QEKLGSYLFMQSFVQDCIIQGGCCPGSSILLSHFYNCNIIGLDAHGMDFLANSFNKSNYD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCH EIRGPDTGTVFYNCNLKHTKINDGLREDGSDRTMFNSKEYFSDYIERRSRNLKLDDNFSK HCCCCCCCEEEEECCEEECCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH CVESIKKGTDSSFSKKNTENNNVFFKNSNLIGANLGYYYSGDRCKDCAIDPNTNYSKDGL HHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCC TAQKYMYMDLDGAISKEQIPDFLKKVSAINIDVINFYNSESKTKEKYKNAFLELESFLST CEEEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH LYVENKSYEEKYHFDNSRVEFFIFKDMQENAQNIINNMIESDRIKFVESIINKMIPPPDG HHHCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TILTENPKEYVQKQIKESHKESATNVTFDYKELAPIFEGVEEKQIKALSNQLEHIKSFKT CEECCCHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH DYDSRLNKYARDFYYFSSAFAINWEDLLKNYQEIRASIKDYDDLLREIKELIISRNKSLE HHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DKRTLFDNKRDNWNSIEVQDEVNALNAKIVDCDDKIRSKLTIVRNNRLENQYKDDKNISD HHHHHHCCCCCCCCCEEEHHHHHHHCCEEECCCHHHHHHEEEEECCCCHHHHCCCCCHHH AMRNILDWFERYPDIVQNITQA HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVAKLKPDVFVNTNPFLEAMYKERLSHKGYSDKIALSINDKKYNVNSKDIENILDGKGDL CCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCHHHHHHHHCCCCHH FKKRTLWEFVRDLFPGSHIKEVKGLIYEFVTKVDNKAEVFDKIKSLAKKEQQWRFSTKTD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC FTTNENNEVIVSRSFNLYTGATSNDNEKKQVSSERLTLDNYLDDLHFDNSPLVRLTFDNY CCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC SVKLATLIKNKIPIINTTINLSSLSKDVLNSLKYCSFKNVIFSGVINSPNLEGPVFENCY CEEEHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FDDCKFNNIQLYETNDDTVESGNKKPIKGMFKGCFISKCKIENYRCETSKIYTVTQPDSI CCCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHEEEECCCEEECCCEEEEECCCHHH QEKLGSYLFMQSFVQDCIIQGGCCPGSSILLSHFYNCNIIGLDAHGMDFLANSFNKSNYD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCH EIRGPDTGTVFYNCNLKHTKINDGLREDGSDRTMFNSKEYFSDYIERRSRNLKLDDNFSK HCCCCCCCEEEEECCEEECCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH CVESIKKGTDSSFSKKNTENNNVFFKNSNLIGANLGYYYSGDRCKDCAIDPNTNYSKDGL HHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCC TAQKYMYMDLDGAISKEQIPDFLKKVSAINIDVINFYNSESKTKEKYKNAFLELESFLST CEEEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH LYVENKSYEEKYHFDNSRVEFFIFKDMQENAQNIINNMIESDRIKFVESIINKMIPPPDG HHHCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TILTENPKEYVQKQIKESHKESATNVTFDYKELAPIFEGVEEKQIKALSNQLEHIKSFKT CEECCCHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH DYDSRLNKYARDFYYFSSAFAINWEDLLKNYQEIRASIKDYDDLLREIKELIISRNKSLE HHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DKRTLFDNKRDNWNSIEVQDEVNALNAKIVDCDDKIRSKLTIVRNNRLENQYKDDKNISD HHHHHHCCCCCCCCCEEEHHHHHHHCCEEECCCHHHHHHEEEEECCCCHHHHCCCCCHHH AMRNILDWFERYPDIVQNITQA HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA