| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209399160
Identifier: 209399160
GI number: 209399160
Start: 1384953
End: 1385201
Strand: Reverse
Name: 209399160
Synonym: ECH74115_1390
Alternate gene names: NA
Gene position: 1385201-1384953 (Counterclockwise)
Preceding gene: 209397605
Following gene: 209399109
Centisome position: 24.86
GC content: 50.6
Gene sequence:
>249_bases ATGGCTACATACGGCGGTCAGTTTACGCTTACTGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGT AATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGAC GATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTG GCAGCCTGA
Upstream 100 bases:
>100_bases TTCGAATAGTTTTTACGAGGTTCTTTTCGCCAGTCCTGTAATTCCATACTTAGATGTCCGTCTATATCAGATGGGCGTCT AAGTTACCAATTTTCGTCTG
Downstream 100 bases:
>100_bases GTTCACAGATAAAACACTCTCCAGGAAACCCGGGGCGGTTCAAACCTGATTCTGGAAAAGGACTTTGTGGATTGTTGCTA TTGCCAGTGAGATTGAATGA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MATYGGQFTLTDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDL AA
Sequences:
>Translated_82_residues MATYGGQFTLTDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDL AA >Mature_81_residues ATYGGQFTLTDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLA A
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 9289; Mature: 9158
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYGGQFTLTDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLG CCCCCCEEEEECHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHHHHCC HTPPAEAEKAYYASIGNDDLAA CCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure ATYGGQFTLTDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLG CCCCCEEEEECHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHHHHCC HTPPAEAEKAYYASIGNDDLAA CCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2159625; 2824781 [H]