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The map label for this gene is ypjA [H]

Identifier: 209399080

GI number: 209399080

Start: 1601355

End: 1602065

Strand: Direct

Name: ypjA [H]

Synonym: ECH74115_1658

Alternate gene names: 209399080

Gene position: 1601355-1602065 (Clockwise)

Preceding gene: 209398251

Following gene: 209400860

Centisome position: 28.74

GC content: 51.05

Gene sequence:

>711_bases
ATGACAGTGGGGATCGACAGCCGTAATGATATTCCTGAGGGGATTGCGACGCTGGGCGCTTTTATGGGTTATTCCCATTC
ACATATCGGTTTTGATCGTGGAGGACATGGCAGTGTGGACAGTTATTCTCTGGGCGGCTATGCCAGTTGGGAACATGAAA
GTGGTTTCTATCTGGACGGTGTCGTGAAGCTGAACCGTTTTGAAAGTAACGTAGCCGGTAAAATGAGCAGCGGTGGAGCC
GCCAATGGCAGTTACCATAGCAACGGGCTGGGCGGTCACATTGAAACCGGGATGCGATTTACCGATGGTAACTGGAACCT
GACGCCGTATGCCTCGTTAACGGGGTTCACCGCTGATAACCCCGAATATCATTTATCCAATGGCATGGAATCGAAATCAG
TCGATACCCGCAGTATATATCGTGAACTGGGTGCAACGCTGAGTTACAACATGCGTCTGGGGAACGGTATGGAAGTTGAG
CCGTGGCTGAAGGCGGCTGTGCGCAAAGAATTTGTCGATGATAACCGGGTGAAAGTGAATAGTGACGGTAATTTCGTCAA
TGATTTGTCGGGCAGACGTGGAATATACCAGGCAGGTATTAAAGCCTCATTCAGCAGTACGTTAAGCGGGCATCTTGGGG
TGGGGTATAGCAACGGTGCTGGTATGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGA

Upstream 100 bases:

>100_bases
ATGATCTGGCAGCCTGAGTTCACAGATAAAACACTCTCCAGGAAACCCGGGGCGGTTCACCACTGATGCGGGTGCCGGGT
TTGAGCAGACGCTGACCGGA

Downstream 100 bases:

>100_bases
CCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTAAAAGAGAAAATTCTGGGGTAAAAAAAGCC
CGCCAGTTACGGCGGGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTVGIDSRNDIPEGIATLGAFMGYSHSHIGFDRGGHGSVDSYSLGGYASWEHESGFYLDGVVKLNRFESNVAGKMSSGGA
ANGSYHSNGLGGHIETGMRFTDGNWNLTPYASLTGFTADNPEYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEVE
PWLKAAVRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHLGVGYSNGAGMESPWNAVAGVNWSF

Sequences:

>Translated_236_residues
MTVGIDSRNDIPEGIATLGAFMGYSHSHIGFDRGGHGSVDSYSLGGYASWEHESGFYLDGVVKLNRFESNVAGKMSSGGA
ANGSYHSNGLGGHIETGMRFTDGNWNLTPYASLTGFTADNPEYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEVE
PWLKAAVRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHLGVGYSNGAGMESPWNAVAGVNWSF
>Mature_235_residues
TVGIDSRNDIPEGIATLGAFMGYSHSHIGFDRGGHGSVDSYSLGGYASWEHESGFYLDGVVKLNRFESNVAGKMSSGGAA
NGSYHSNGLGGHIETGMRFTDGNWNLTPYASLTGFTADNPEYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEVEP
WLKAAVRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHLGVGYSNGAGMESPWNAVAGVNWSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI87082145, Length=236, Percent_Identity=96.6101694915254, Blast_Score=479, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899
- InterPro:   IPR003991 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 25306; Mature: 25175

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGIDSRNDIPEGIATLGAFMGYSHSHIGFDRGGHGSVDSYSLGGYASWEHESGFYLDG
CEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEE
VVKLNRFESNVAGKMSSGGAANGSYHSNGLGGHIETGMRFTDGNWNLTPYASLTGFTADN
EEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCHHCCCCCCCC
PEYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEVEPWLKAAVRKEFVDDNRVKVN
CCCHHCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEC
SDGNFVNDLSGRRGIYQAGIKASFSSTLSGHLGVGYSNGAGMESPWNAVAGVNWSF
CCCCCHHHCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
TVGIDSRNDIPEGIATLGAFMGYSHSHIGFDRGGHGSVDSYSLGGYASWEHESGFYLDG
EECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEE
VVKLNRFESNVAGKMSSGGAANGSYHSNGLGGHIETGMRFTDGNWNLTPYASLTGFTADN
EEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCHHCCCCCCCC
PEYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEVEPWLKAAVRKEFVDDNRVKVN
CCCHHCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEC
SDGNFVNDLSGRRGIYQAGIKASFSSTLSGHLGVGYSNGAGMESPWNAVAGVNWSF
CCCCCHHHCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]