| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yhgE [H]
Identifier: 209399070
GI number: 209399070
Start: 4345989
End: 4347713
Strand: Reverse
Name: yhgE [H]
Synonym: ECH74115_4707
Alternate gene names: 209399070
Gene position: 4347713-4345989 (Counterclockwise)
Preceding gene: 209397286
Following gene: 209399440
Centisome position: 78.03
GC content: 49.86
Gene sequence:
>1725_bases ATGGATAACGTTGAACTTTCACCCGCAACACGCTGGGGGATGATTGCTACCGGATTACTTCAGGGTCTGGTTTGCTACCT GCTGATCGCCTGGCTTTCCGGAAAAAATCACAGTTGGATTGTTTATGGCGTGCCTGCGACCGTCGCGTTTTCATCCGTTT TACTCTTCTCCGTGATCTCTTTTAAACAGAAGCGCCTTTGGGGATGGCTGGCGCTGGTGTTTATTGCCACGCTGGGGATG AGCGGCTGGCTGAAGTGGCAAACTGATGGCATGACCCCCTGGAGAGCTGAAAAGGCGCTTTGGGATTTTGGTTGCTATCT GCTGCTGATGGCAATGTTGTTGCTACCGTGGATACAACAAAGCCTTCGCATCCGCAATGACAGTAGCCGCTATCGCTATT TTTACCAGTCAGTATGGCATAACGTACTTATATTACTGGTGATTTTTCTCGCCAATGGTCTGACGTGGCTGGTGCTTTTA CTGTGGAGTGAGTTGTTTAAACTTGTTGGCATCACGTTTTTCAAAACGCTCTTTTTTGCAACCGACTGGTTTATTTATCT CACGTTAGGTCTGGTTACCGCGCTGGCGGTGATCCTCGCGCGAACACAGTCACGTTTAATCGACTCTATTCAAAAGTTGT TCACGTTAATCGCCACGGGGTTGCTGCCGTTAGTATCATTGCTAACCCTGATGTTTATCATCACCCTGCCGTTTACAGGC CTGAGTGCGATTTCTCGCCACATCTCCGCCGCCGGGTTGCTGTTAACGCTGGCCTTTTTGCAATTGATCTTAATGGCTAT TGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACGGGGCCGTTGCGTTGCCTGATTAAAACCGCTCTGCTGGTTGCTC CGCTGTATGTGTTCATCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGC GCGCTGGCGGTGCTGGTGTTACTGGTATGGTCGCTGGGGTATTTTGTCAGTATCGTCTGGCGTAAAGGGCAAAATCCCCT TGTTCTTCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTAATACTGGTGCTTCTTAATTCGCCGGTGCTGG ACAGTATGCGCATTAGTGTGAACAGTCATATGGCGCGTTATCAGAGCGGCAAAAACACGCCAGACCAGGTAACTATCTAC ATGCTCGAACACAGCGGTCGCTATGGACGTGCGGCGCTTGAGTCGCTGAAAAGCGATGCCGAGTATATGAAAGACCCGAA ACGCGCGCGGGATCTACTGATGGCGTTAGATGGAGAGCAACATCTTCAGCAACAGATATCGGAAAAAGTATTAGCCGAAA ATGTGTTAATTGCCCCTGGTTCTGGTAAACCGGATGCGACATTCTGGTCGGCCTTAATCCAGGATCGCTATAACGTGATG ACCTGTATTGAAAAAGACGCCTGCGTACTGGTCGAGCAAGATCTGAATAGTGATGGCAGGGCAGAGCGGATCCTCTTTGC CTTTGATGATGAAAGATACATTGTCTATGGCTTTGATCCTGACAAGAAAGAATGGCAAGAGCTTACGATGAGTTTACTTC CGCGTGATATAACGAAAGAAAAATTACTCACAGCTGCGAAGGATGGAAAACTGGGAACGAAGCCTAAAGCGTGGCGCGAT CTTGTAGTGGATGGTGAAAGGCTGGATGTGAATCTGAATGAGTGA
Upstream 100 bases:
>100_bases GATTCACCACGCTAACTTTTTTTGATTATTTTCTGAAAAAAGCAAAATACTACTGCCCGGATGCGATAATTAACCCACCT TTTGATTCTGGATAACCAAC
Downstream 100 bases:
>100_bases CAAAGCGCATCAGGTGTATTAGTCGTAAAATCCGGCAGAGCTCTCTCTGCCGGACATACTCATTAATGAACTTGCGGATC TGCCGGAGACGCGTTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQTDGMTPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLL LWSELFKLVGITFFKTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFIAAWALWLRVAQYGWTVDRLQG ALAVLVLLVWSLGYFVSIVWRKGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEHSGRYGRAALESLKSDAEYMKDPKRARDLLMALDGEQHLQQQISEKVLAENVLIAPGSGKPDATFWSALIQDRYNVM TCIEKDACVLVEQDLNSDGRAERILFAFDDERYIVYGFDPDKKEWQELTMSLLPRDITKEKLLTAAKDGKLGTKPKAWRD LVVDGERLDVNLNE
Sequences:
>Translated_574_residues MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQTDGMTPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLL LWSELFKLVGITFFKTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFIAAWALWLRVAQYGWTVDRLQG ALAVLVLLVWSLGYFVSIVWRKGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEHSGRYGRAALESLKSDAEYMKDPKRARDLLMALDGEQHLQQQISEKVLAENVLIAPGSGKPDATFWSALIQDRYNVM TCIEKDACVLVEQDLNSDGRAERILFAFDDERYIVYGFDPDKKEWQELTMSLLPRDITKEKLLTAAKDGKLGTKPKAWRD LVVDGERLDVNLNE >Mature_574_residues MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQTDGMTPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLL LWSELFKLVGITFFKTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFIAAWALWLRVAQYGWTVDRLQG ALAVLVLLVWSLGYFVSIVWRKGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEHSGRYGRAALESLKSDAEYMKDPKRARDLLMALDGEQHLQQQISEKVLAENVLIAPGSGKPDATFWSALIQDRYNVM TCIEKDACVLVEQDLNSDGRAERILFAFDDERYIVYGFDPDKKEWQELTMSLLPRDITKEKLLTAAKDGKLGTKPKAWRD LVVDGERLDVNLNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yrdB [H]
Homologues:
Organism=Escherichia coli, GI1789805, Length=574, Percent_Identity=95.8188153310105, Blast_Score=1004, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64908; Mature: 64908
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH FKQKRLWGWLALVFIATLGMSGWLKWQTDGMTPWRAEKALWDFGCYLLLMAMLLLPWIQQ HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFKTLFFA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGYFVSIVWRKGQNPLVLQGKVNLAVSLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHH VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEHSGRYGRAALESLKSDA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EYMKDPKRARDLLMALDGEQHLQQQISEKVLAENVLIAPGSGKPDATFWSALIQDRYNVM HHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH TCIEKDACVLVEQDLNSDGRAERILFAFDDERYIVYGFDPDKKEWQELTMSLLPRDITKE HHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCHHHHH KLLTAAKDGKLGTKPKAWRDLVVDGERLDVNLNE HHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH FKQKRLWGWLALVFIATLGMSGWLKWQTDGMTPWRAEKALWDFGCYLLLMAMLLLPWIQQ HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFKTLFFA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGYFVSIVWRKGQNPLVLQGKVNLAVSLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHH VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEHSGRYGRAALESLKSDA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EYMKDPKRARDLLMALDGEQHLQQQISEKVLAENVLIAPGSGKPDATFWSALIQDRYNVM HHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH TCIEKDACVLVEQDLNSDGRAERILFAFDDERYIVYGFDPDKKEWQELTMSLLPRDITKE HHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCHHHHH KLLTAAKDGKLGTKPKAWRDLVVDGERLDVNLNE HHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]