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The map label for this gene is yfcO [H]

Identifier: 209399052

GI number: 209399052

Start: 3217143

End: 3217985

Strand: Reverse

Name: yfcO [H]

Synonym: ECH74115_3473

Alternate gene names: 209399052

Gene position: 3217985-3217143 (Counterclockwise)

Preceding gene: 209398508

Following gene: 209400438

Centisome position: 57.75

GC content: 42.82

Gene sequence:

>843_bases
ATGAAAAAATGGACGATATTTTTGACAAGTCTGATATTACTTGCTCTCAGTTTAGAAACACCAAAGTGCTATGCCGGTGA
TAAACTCATGAGTGCAAGCTTTTCCAGTACTAAAATTTATTATGCGATGAAAAACGTTACTGCTTCCGGCAGTTTATATT
TCTATGTCACGGTAGTGACGCCGGGAGAAGTAAGCTACGGACAATACAACTCCAATGCAAGAAAAGGCGACACCCTCAAG
TTAATATCCTGGAGCGGATCTGGCCCGGCACCGACACTGGTTTTGACTGATTATAGACGTACGGACACCTCAAATTGCCC
TGGTATCAATACTCGTGTCTTTGTCTGTGCATATATGACTTTTAACGTCACTGTAGAATCTGATAATTATGGTTGTCCGT
GGATTGCCTCATTTTATTCAGTATCTGAGGCATTTGGATTTGGTACGTATACAAGCCCAACAGTTCATGATTCTATTTGC
CCGACAATTCCCGTCGCTTCGTTTGATATATCCTGGAGTGATAATTATGTTAGCCATAATAAAGCGCTGCGATTGCAATC
CGATGGTTCGACAATCACGACTACGCTTTCGACCTACCTGATGGAAAGCGGCAAACTCTGCGATGGCAGTATTTTTGATT
CCAGAGGGGCATATTGTCGTGCTGTTTCTGACTTATTAACCTTTACCTCGTATGGTTGTGATAATGCAAAGGTGACAGTC
ACCCCCTCACGTCAACCATTGACGGATAGAAAGCTACACGACATTGTGGTACAGGTGAATACCAGTAGCCGTGAGCCAAT
TGATTCTACATGCCGTTTCCAGTATGTACTGAATGAACTGTAG

Upstream 100 bases:

>100_bases
AGTGTCAATTTTAATGCCTGGTTACAGACCGTAAATGGACGAAATGTTACATCGGGTGATTTCACCGCCACAATGACGGT
AACTTTTGAGTATTTTTAAA

Downstream 100 bases:

>100_bases
TTGTGCGTTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAACTGAATCACAACGTATTGAATTTGCACATT
TTGATAAGCCGGATCAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKKWTIFLTSLILLALSLETPKCYAGDKLMSASFSSTKIYYAMKNVTASGSLYFYVTVVTPGEVSYGQYNSNARKGDTLK
LISWSGSGPAPTLVLTDYRRTDTSNCPGINTRVFVCAYMTFNVTVESDNYGCPWIASFYSVSEAFGFGTYTSPTVHDSIC
PTIPVASFDISWSDNYVSHNKALRLQSDGSTITTTLSTYLMESGKLCDGSIFDSRGAYCRAVSDLLTFTSYGCDNAKVTV
TPSRQPLTDRKLHDIVVQVNTSSREPIDSTCRFQYVLNEL

Sequences:

>Translated_280_residues
MKKWTIFLTSLILLALSLETPKCYAGDKLMSASFSSTKIYYAMKNVTASGSLYFYVTVVTPGEVSYGQYNSNARKGDTLK
LISWSGSGPAPTLVLTDYRRTDTSNCPGINTRVFVCAYMTFNVTVESDNYGCPWIASFYSVSEAFGFGTYTSPTVHDSIC
PTIPVASFDISWSDNYVSHNKALRLQSDGSTITTTLSTYLMESGKLCDGSIFDSRGAYCRAVSDLLTFTSYGCDNAKVTV
TPSRQPLTDRKLHDIVVQVNTSSREPIDSTCRFQYVLNEL
>Mature_280_residues
MKKWTIFLTSLILLALSLETPKCYAGDKLMSASFSSTKIYYAMKNVTASGSLYFYVTVVTPGEVSYGQYNSNARKGDTLK
LISWSGSGPAPTLVLTDYRRTDTSNCPGINTRVFVCAYMTFNVTVESDNYGCPWIASFYSVSEAFGFGTYTSPTVHDSIC
PTIPVASFDISWSDNYVSHNKALRLQSDGSTITTTLSTYLMESGKLCDGSIFDSRGAYCRAVSDLLTFTSYGCDNAKVTV
TPSRQPLTDRKLHDIVVQVNTSSREPIDSTCRFQYVLNEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium yadU [H]

Homologues:

Organism=Escherichia coli, GI87082086, Length=255, Percent_Identity=43.921568627451, Blast_Score=224, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021407 [H]

Pfam domain/function: PF11245 DUF2544 [H]

EC number: NA

Molecular weight: Translated: 30879; Mature: 30879

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWTIFLTSLILLALSLETPKCYAGDKLMSASFSSTKIYYAMKNVTASGSLYFYVTVVT
CCEEEHHHHHHHHHHEECCCCCCCCCCCEEECCCCCEEEEEEEECEEECCEEEEEEEEEC
PGEVSYGQYNSNARKGDTLKLISWSGSGPAPTLVLTDYRRTDTSNCPGINTRVFVCAYMT
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEE
FNVTVESDNYGCPWIASFYSVSEAFGFGTYTSPTVHDSICPTIPVASFDISWSDNYVSHN
EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCC
KALRLQSDGSTITTTLSTYLMESGKLCDGSIFDSRGAYCRAVSDLLTFTSYGCDNAKVTV
EEEEEECCCCEEEHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEE
TPSRQPLTDRKLHDIVVQVNTSSREPIDSTCRFQYVLNEL
CCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKWTIFLTSLILLALSLETPKCYAGDKLMSASFSSTKIYYAMKNVTASGSLYFYVTVVT
CCEEEHHHHHHHHHHEECCCCCCCCCCCEEECCCCCEEEEEEEECEEECCEEEEEEEEEC
PGEVSYGQYNSNARKGDTLKLISWSGSGPAPTLVLTDYRRTDTSNCPGINTRVFVCAYMT
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEE
FNVTVESDNYGCPWIASFYSVSEAFGFGTYTSPTVHDSICPTIPVASFDISWSDNYVSHN
EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCC
KALRLQSDGSTITTTLSTYLMESGKLCDGSIFDSRGAYCRAVSDLLTFTSYGCDNAKVTV
EEEEEECCCCEEEHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEE
TPSRQPLTDRKLHDIVVQVNTSSREPIDSTCRFQYVLNEL
CCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]