| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209398979
Identifier: 209398979
GI number: 209398979
Start: 4404172
End: 4405083
Strand: Direct
Name: 209398979
Synonym: ECH74115_4760
Alternate gene names: NA
Gene position: 4404172-4405083 (Clockwise)
Preceding gene: 209399576
Following gene: 209397115
Centisome position: 79.04
GC content: 32.68
Gene sequence:
>912_bases ATGGGTACAGCAGCTATAAGTCATTTACGATATGATCTTAACAAATATGCCCTTTCTTTACGCAAAACCGCAACACTTGC TTCAACATTTTTTATTGAGTCCCCATTAGTTAGATTCGAGTATCTGCAAGAAATAGAAAATACTATTAATGATATTACTC ACAGATTCAATTCTTCATATGACATCAATGAAAAAGCACGACTTATCAATGAATTAAAAATGGAGTCAGAAACAGCAAGA AAAGAATATCAACTTTTCAGACAAGGAAATTATGATAAATATATCACTACTGATATTTTCGAAGAACATGGTTTGATAAA ATATGTGAACTTAAGTTTCGATATTGTTGCATCTGTAGGACAGGTCGTAGGCGGGGTTGGCGCGTTGAAATTTGGTAAGG TAGTGCATTCAAACCGAATAAAAGGTATAGGCGTCACATTAGTTGCTCATGGGGCGAATAATTTTTATGAAAGCTTATCA CCTTTATTTTTTAACGAGTATGATTCAGGTCCAATACGTGAACTCTACAGAGTAATAGCAAAAAAAATGGGAGGTGATAT TAATTCTGCTGATTATGCATACAGCATCGTGGACTTTTCGATTACTGCATATGGTGGATATTCAGGCATGAAAATCGTAC CTAAGTATAATAGATTGATTCGTCCTTCATTAGGAAATAGACCTGGTACAGGACGATTATTTCATTACACATCAGTTGAT TTTAAAAATAAATTCTCATTAAAACCTACCCCTTTAAAAATCATACAAATTAGTTCTACTGTAAAAAAATTCAAGGTTAC ATTTTATGATGAAAATACAAATTTGAGGATAAAACATGGCCTCAATAATCATATGCCACATCAATTATTAATGAATATAT CAGGAACTACAACTGGTGCAGGAATACAATAA
Upstream 100 bases:
>100_bases AGACCTTTGAATCATTACTCGTTAATATTTCTTATTAAAGAGAACATATTTTCGCAAGCAATAGTTATTACTGTTTGTTT ATGGATAGAGAGTCTACTTA
Downstream 100 bases:
>100_bases CAGAATAACTTAATTTTAAGATAAAACATTTTGAGGCATAATTGGTAAGAGAATTTAGTATCCAGTTTTCTGTGTATGAT AAGAATAGCGAACATGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MGTAAISHLRYDLNKYALSLRKTATLASTFFIESPLVRFEYLQEIENTINDITHRFNSSYDINEKARLINELKMESETAR KEYQLFRQGNYDKYITTDIFEEHGLIKYVNLSFDIVASVGQVVGGVGALKFGKVVHSNRIKGIGVTLVAHGANNFYESLS PLFFNEYDSGPIRELYRVIAKKMGGDINSADYAYSIVDFSITAYGGYSGMKIVPKYNRLIRPSLGNRPGTGRLFHYTSVD FKNKFSLKPTPLKIIQISSTVKKFKVTFYDENTNLRIKHGLNNHMPHQLLMNISGTTTGAGIQ
Sequences:
>Translated_303_residues MGTAAISHLRYDLNKYALSLRKTATLASTFFIESPLVRFEYLQEIENTINDITHRFNSSYDINEKARLINELKMESETAR KEYQLFRQGNYDKYITTDIFEEHGLIKYVNLSFDIVASVGQVVGGVGALKFGKVVHSNRIKGIGVTLVAHGANNFYESLS PLFFNEYDSGPIRELYRVIAKKMGGDINSADYAYSIVDFSITAYGGYSGMKIVPKYNRLIRPSLGNRPGTGRLFHYTSVD FKNKFSLKPTPLKIIQISSTVKKFKVTFYDENTNLRIKHGLNNHMPHQLLMNISGTTTGAGIQ >Mature_302_residues GTAAISHLRYDLNKYALSLRKTATLASTFFIESPLVRFEYLQEIENTINDITHRFNSSYDINEKARLINELKMESETARK EYQLFRQGNYDKYITTDIFEEHGLIKYVNLSFDIVASVGQVVGGVGALKFGKVVHSNRIKGIGVTLVAHGANNFYESLSP LFFNEYDSGPIRELYRVIAKKMGGDINSADYAYSIVDFSITAYGGYSGMKIVPKYNRLIRPSLGNRPGTGRLFHYTSVDF KNKFSLKPTPLKIIQISSTVKKFKVTFYDENTNLRIKHGLNNHMPHQLLMNISGTTTGAGIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34228; Mature: 34096
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTAAISHLRYDLNKYALSLRKTATLASTFFIESPLVRFEYLQEIENTINDITHRFNSSY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC DINEKARLINELKMESETARKEYQLFRQGNYDKYITTDIFEEHGLIKYVNLSFDIVASVG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCEEEEEECCHHHHHHHH QVVGGVGALKFGKVVHSNRIKGIGVTLVAHGANNFYESLSPLFFNEYDSGPIRELYRVIA HHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHCCCCEECCCCCCHHHHHHHHHH KKMGGDINSADYAYSIVDFSITAYGGYSGMKIVPKYNRLIRPSLGNRPGTGRLFHYTSVD HHHCCCCCCCCEEEEEEEEEEEEECCCCCCEEEECHHHHCCCCCCCCCCCCEEEEEEECC FKNKFSLKPTPLKIIQISSTVKKFKVTFYDENTNLRIKHGLNNHMPHQLLMNISGTTTGA CCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEECCCCCCCCHHHHEECCCCCCCC GIQ CCC >Mature Secondary Structure GTAAISHLRYDLNKYALSLRKTATLASTFFIESPLVRFEYLQEIENTINDITHRFNSSY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC DINEKARLINELKMESETARKEYQLFRQGNYDKYITTDIFEEHGLIKYVNLSFDIVASVG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCEEEEEECCHHHHHHHH QVVGGVGALKFGKVVHSNRIKGIGVTLVAHGANNFYESLSPLFFNEYDSGPIRELYRVIA HHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHCCCCEECCCCCCHHHHHHHHHH KKMGGDINSADYAYSIVDFSITAYGGYSGMKIVPKYNRLIRPSLGNRPGTGRLFHYTSVD HHHCCCCCCCCEEEEEEEEEEEEECCCCCCEEEECHHHHCCCCCCCCCCCCEEEEEEECC FKNKFSLKPTPLKIIQISSTVKKFKVTFYDENTNLRIKHGLNNHMPHQLLMNISGTTTGA CCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEECCCCCCCCHHHHEECCCCCCCC GIQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA