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The map label for this gene is ydeE [H]

Identifier: 209398928

GI number: 209398928

Start: 2060344

End: 2061531

Strand: Direct

Name: ydeE [H]

Synonym: ECH74115_2148

Alternate gene names: 209398928

Gene position: 2060344-2061531 (Clockwise)

Preceding gene: 209396282

Following gene: 209397563

Centisome position: 36.98

GC content: 49.66

Gene sequence:

>1188_bases
ATGAACTTATCCCTACGACGCTCTACCAGCGCCCTTCTTGCCTCGTCGTTGTTATTAACCATCGGACGCGGCGCCACGCT
GCCATTTATGACCATTTACTTGAGTCGCCAGTACAGCCTGAGTGTCGATCTAATCGGTTATGCGATGACAATTGCGCTCA
CTATTGGCGTCGTTTTTAGCCTCGGTTTTGGTATCCTGGCGGATAAGTTCGACAAGAAACGCTATATGTTACTGGCAATT
ACCGCCTTCGCCAGCGGTTTTATTGCCATTCCTTTAGTGAATAACGTGACGCTGGTGGTGCTCTTTTTTGCCCTCATTAA
CTGCGCCTATTCCGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCATCCACCAGCAAAACGAAGATCT
TCTCGATCAACTACACCATGCTCAATATTGGCTGGACCGTCGGCCCGCCACTCGGCACGCTGTTGGTCATGCAGAGCATC
AATCTGCCCTTTTGGCTGGCCGCTATCTGCTCTGCGTTTCCCATGTTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAA
AATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAGGCACTGTTGTGGTTTACCTGCT
CTGGCTTTCTGGCTTCTTTTGTTAGTGGCGCATTTGCTTCATGCATTTCACAATATGTGATGGTGATTGCTGATGGTGAT
TTTGCCGAAAAGGTGGTCGCGGTTGTTCTTCCAGTGAATGCTGCCATGGTGGTTACGTTGCAATATTCCGTGGGCCGCCG
CCTTAACCCGGCTAACATCCGCGCGCTGATGACAGCAGGCACCCTCTGTTTCGTCATCGGTCTGATCGGTTTTATTTTTT
CCGGCAACAGCCTGCTATTGTGGGGTATGTCAGCTGCGGTATTTACTGTCGGTGAAATAATTTATGCGCCGGGCGAGTAT
ATGTTGATTGACCATATTGCGCCGCCAGGAATGAAAGCCAGCTATTTTTCCGCCCAGTCATTAGGCTGGTTGGGCGCAGC
GGTAAATCCATTAGTGAGTGGTGTTGTACTTACCACTCTCCCGTCGTCTTCGCTGTTTATCATTCTGGCGTTAGTCATCA
TTGCCGCGTGGGCGCTGATGTTAAAAGGTATTAACGCCAGACCCCAGAGGCAACCAGCACTCTGTTGA

Upstream 100 bases:

>100_bases
CATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAA
ACGCACTGCCGGACAGACAA

Downstream 100 bases:

>100_bases
CGTTCGTGCCGTTCCACTACTGGCACGGCTTCGCTAATCATTATTCTGAGGCAAAGGCATAGCCTTCATCTTCCCAGCCG
GTTATCCCGCCGAGCATGAT

Product: putative MFS-type transporter YdeE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI
TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLSSTSKTKIFSINYTMLNIGWTVGPPLGTLLVMQSI
NLPFWLAAICSAFPMFFIQIWVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGD
FAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLIGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEY
MLIDHIAPPGMKASYFSAQSLGWLGAAVNPLVSGVVLTTLPSSSLFIILALVIIAAWALMLKGINARPQRQPALC

Sequences:

>Translated_395_residues
MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI
TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLSSTSKTKIFSINYTMLNIGWTVGPPLGTLLVMQSI
NLPFWLAAICSAFPMFFIQIWVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGD
FAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLIGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEY
MLIDHIAPPGMKASYFSAQSLGWLGAAVNPLVSGVVLTTLPSSSLFIILALVIIAAWALMLKGINARPQRQPALC
>Mature_395_residues
MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI
TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLSSTSKTKIFSINYTMLNIGWTVGPPLGTLLVMQSI
NLPFWLAAICSAFPMFFIQIWVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGD
FAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLIGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEY
MLIDHIAPPGMKASYFSAQSLGWLGAAVNPLVSGVVLTTLPSSSLFIILALVIIAAWALMLKGINARPQRQPALC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787815, Length=395, Percent_Identity=96.7088607594937, Blast_Score=734, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42592; Mature: 42592

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHH
LGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAW
HHHHHHHHHHCCCEEEEEEEEHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
FADNLSSTSKTKIFSINYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPMFFIQI
HHCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
WVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGD
HHHCCCEEEEECCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCC
FAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLIGFIFSGNSLLL
HHHHHHHHEEECCCEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
WGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAVNPLVSGVVLTTL
EEHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHCHHCCCHHHHHHHHHHHCHHEEEC
PSSSLFIILALVIIAAWALMLKGINARPQRQPALC
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHH
LGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAW
HHHHHHHHHHCCCEEEEEEEEHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
FADNLSSTSKTKIFSINYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPMFFIQI
HHCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
WVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGD
HHHCCCEEEEECCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCC
FAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLIGFIFSGNSLLL
HHHHHHHHEEECCCEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
WGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAVNPLVSGVVLTTL
EEHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHCHHCCCHHHHHHHHHHHCHHEEEC
PSSSLFIILALVIIAAWALMLKGINARPQRQPALC
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]