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The map label for this gene is tfaD [H]

Identifier: 209398811

GI number: 209398811

Start: 2511079

End: 2511495

Strand: Direct

Name: tfaD [H]

Synonym: ECH74115_2667

Alternate gene names: 209398811

Gene position: 2511079-2511495 (Clockwise)

Preceding gene: 209396461

Following gene: 209398146

Centisome position: 45.07

GC content: 49.64

Gene sequence:

>417_bases
GTGGCTGTTTTCAACAGTAATGAGGCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGGTTTATGACGTGGCTTC
CGGCGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTACCTGGTTGTCGCCGGATGGAGAGTGTCAGA
AGTGGAACGGCACATCCTGGGCGAAAGATGCAGAAGCAGAAAAACTGTTTCGGGTACGGGAGGCAGAAGAAACAAAAAAC
AGCCTGATGCAGGTAGCCAGTGAGCATATTGCGCCACTTCAGGATGCCGTAGATTTGGATATTGCGACGGAGGAAGAGGC
ATCGTTACTGGCTGCATGGAAGACATATCGGGTATTGTTGAATCGTGTTGATACAACAGTAGCAGCGGATGTTGAGTGGC
CAGTCGCCCCACAATAA

Upstream 100 bases:

>100_bases
TAATGAATTTATTGGTGAAGGTGACGCATACATTCCGCCTCATACAGGTCTGCCAGCAAACAGTACCGATATTGCACCGC
CAGATATTCCGGCTGGCTTC

Downstream 100 bases:

>100_bases
AAAGAAAAAGCCATCGACAGAAATATCGATGGCTTTATGTACTCTATTTATACAATACAACACCACTCTTTTTAGTTATA
TATGTGCAGTTTGATGGTAT

Product: putative Tail fiber assembly protein homolog from lambdoid prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MAVFNSNEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPDGECQKWNGTSWAKDAEAEKLFRVREAEETKN
SLMQVASEHIAPLQDAVDLDIATEEEASLLAAWKTYRVLLNRVDTTVAADVEWPVAPQ

Sequences:

>Translated_138_residues
MAVFNSNEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPDGECQKWNGTSWAKDAEAEKLFRVREAEETKN
SLMQVASEHIAPLQDAVDLDIATEEEASLLAAWKTYRVLLNRVDTTVAADVEWPVAPQ
>Mature_137_residues
AVFNSNEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPDGECQKWNGTSWAKDAEAEKLFRVREAEETKNS
LMQVASEHIAPLQDAVDLDIATEEEASLLAAWKTYRVLLNRVDTTVAADVEWPVAPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage lambda terminase large subunit in the N- terminal section [H]

Homologues:

Organism=Escherichia coli, GI2367120, Length=137, Percent_Identity=84.6715328467153, Blast_Score=244, Evalue=1e-66,
Organism=Escherichia coli, GI1787637, Length=137, Percent_Identity=83.9416058394161, Blast_Score=243, Evalue=2e-66,
Organism=Escherichia coli, GI1787402, Length=130, Percent_Identity=35.3846153846154, Blast_Score=73, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458
- InterPro:   IPR008866 [H]

Pfam domain/function: PF02413 Caudo_TAP; PF05876 Terminase_GpA [H]

EC number: NA

Molecular weight: Translated: 15354; Mature: 15223

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFNSNEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPDGECQKWNGTSW
CCEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCC
AKDAEAEKLFRVREAEETKNSLMQVASEHIAPLQDAVDLDIATEEEASLLAAWKTYRVLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH
NRVDTTVAADVEWPVAPQ
HHHCCEEECCCCCCCCCC
>Mature Secondary Structure 
AVFNSNEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPDGECQKWNGTSW
CEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCCC
AKDAEAEKLFRVREAEETKNSLMQVASEHIAPLQDAVDLDIATEEEASLLAAWKTYRVLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH
NRVDTTVAADVEWPVAPQ
HHHCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]